DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H15 and mga

DIOPT Version :10

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:XP_012824488.2 Gene:mga / 100038161 XenbaseID:XB-GENE-492360 Length:3054 Species:Xenopus tropicalis


Alignment Length:561 Identity:141/561 - (25%)
Similarity:214/561 - (38%) Gaps:215/561 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 CNCDDLTPVQCHLETKELWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPADRYAVLLDV 333
            |...::|..   |:...:|::|:...|||::||.||||||..|...||    :.|..:|.:::|:
 Frog    71 CKSGNITVT---LDNNNMWNEFYRCSTEMVLTKQGRRMFPYCRYWISG----LDPYQKYILVMDI 128

  Fly   334 VPLDSRRYRYAYHRSSWLVAGKADPPPPSRIYAHPDCPLSPEALRKQVVSFEKVKLTNNEMDKSG 398
            .|:|:.||:  ::...|...||::|....|::.||:.|.:.:....|.|||.|:|||||.:|:.|
 Frog   129 SPMDNHRYK--WNGKWWEAGGKSEPHVLGRVFIHPESPSTGQYWMHQPVSFYKLKLTNNILDQEG 191

  Fly   399 QVVLNSMHRYQPRIHLVRLSHGQSIPGSPKELQDMDHKTFVFPETVFTAVTAYQNQLITKLKIDS 463
            .::|:|||||.||:|:|..:....:    .:|...|..||.||:|.|.|||||||..||:||||.
 Frog   192 HIILHSMHRYLPRLHVVPANQSTEV----IQLNGPDVHTFTFPQTEFIAVTAYQNFQITQLKIDC 252

  Fly   464 NPFAKGFRDSS---------------------------------RL---------SDFDRDPMDA 486
            ||||||||:.:                                 ||         ||.:.|| :|
 Frog   253 NPFAKGFREGAMTGKPVKEAKSKNSDQENDSQGPQPHNDSESILRLRELFRAPENSDGETDP-EA 316

  Fly   487 F-----FF---DQHMRTAPLRFFPD---------------------PLMSQLTP----------- 511
            |     ||   |..:..      ||                     .:.|.|.|           
 Frog   317 FNAEHDFFNCKDSRLSN------PDTPRIQSDGLNSPAQTGIGSSPSVASSLDPKGQPNIVIKEE 375

  Fly   512 --------------------------QEADAASMA-----LLEKARQHLQMFGRSPYTE------ 539
                                      :|.|..|.:     :||:   |...|.:.|::|      
 Frog   376 PVDDYDYDYGKEQPTGAINVKQESEEEETDEYSNSDDEYPILER---HFSQFRKQPHSERKRSKS 437

  Fly   540 ---------ML------LPHLYQRSAA---------------------------PPPPPPAP--- 559
                     ||      ||.:|..|.:                           .|||...|   
 Frog   438 SPSGVAKAKMLKLDSGKLPVVYLESCSVAKSTLGVSTLEKTITREKLQRLLAECRPPPEREPFTR 502

  Fly   560 -HLS--AFQLGMWQQQWPQLTAGFLASANQQAALALAAA-------GANRTPPPSMAVAPPAPAT 614
             |::  |.:....::.:.:|      |.|:...|.:..:       |.|:||   :.:....|..
 Frog   503 KHITREAIKRDSNKENFQKL------SKNKDDTLQITVSSSQVLNVGRNKTP---IVLTKTTPNQ 558

  Fly   615 PTSSCGSASPDL---RARPQLN------HYPQRFSPYQVPQ 646
            .|....::||.:   |.||:..      |..:...|.|..|
 Frog   559 TTKLKNNSSPPVKSKRGRPRKQKQDKDVHLAKISGPVQAEQ 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 T-box_TBX20-like 277..473 CDD:410319 83/195 (43%)
mgaXP_012824488.2 T-box_MGA-like 76..261 CDD:410321 83/197 (42%)
MGA_dom 996..1035 CDD:464998
DUF5585 1534..1923 CDD:465521
PTZ00341 <1915..2276 CDD:173534
bHLH_SF 2475..2539 CDD:469605
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.