DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompC and AT5G50140

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:NP_199825.1 Gene:AT5G50140 / 835079 AraportID:AT5G50140 Length:535 Species:Arabidopsis thaliana


Alignment Length:553 Identity:119/553 - (21%)
Similarity:211/553 - (38%) Gaps:131/553 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   891 EENKAGFTAVHLAAQNGHGQ-VLDVLKSTNSLRINSKKLGLTPLHVAAYYGQADTVRELLTSVPA 954
            ::...|.|.:|||.:.|:.: |..:::...||..::.....||||:||..|....:..:|.|...
plant    22 QDESFGGTFLHLAVKLGNEELVKKIVEIHPSLVSSTNTKSDTPLHLAARLGHTSILLLMLESTAE 86

  Fly   955 TVKS--ETPTGQSLFGDLGTESGMTPLHLAAFSGNENVVRLLLNSAGVQVDAATIENGYNPLHLA 1017
            :::|  ||........::..:.|.||||.|..:|:...:...:|.|.:..|:.|::......|||
plant    87 SIESLEETVPNDLKLAEMVNKDGFTPLHCAVMNGSVETLTAFINKAPLSFDSVTLQTSETVFHLA 151

  Fly  1018 CFGGHMSVVGLLLSRSA---ELLQSQDRNGRTGLHIAAMHGHIQMVEILLGQGAEINATDRNGWT 1079
            .....|... :.::::|   .||...|..|.|.||.||..|.:.:|..::.: .:|..|.:|   
plant   152 ARHKKMEAF-IFMAKNANLRRLLYELDGEGNTVLHAAASVGFLSLVSYIVHE-IKIEVTTQN--- 211

  Fly  1080 PLHCAAKAGHLEVVKLLCEAGASPKSETNYGCAAIWFAASEGHNEVLRYLMNKEHDTYGLMEDKR 1144
                              :.|               |.|.:        |:||:.:.:.:|.   
plant   212 ------------------DKG---------------FEAVD--------LLNKDDEDFKMMS--- 232

  Fly  1145 FVYNLMVVSKNHNNKPIQEFVLVSPAPVDTAAKLSNIYIVLSTKEKERAKDLVAAGKQCEAMAT- 1208
                 |::  .|:::.:|. ...||....|.:..:.:    ...|....:.|||...:.|.:.. 
plant   233 -----MIL--GHDSEIVQR-AASSPRDAYTPSTQTEV----ENSEIHHEQGLVAPEIKEENVTNE 285

  Fly  1209 -----ELLALAAGSDSAGKILQATDKRNVEF----LDVLI-ENEQKEVIAHTV--VQRYLQE--- 1258
                 |.:.|....|...|:|..||....:.    ..:|. |.|.:.||::|:  ::..|:|   
plant   286 NNKVFEAIDLPTKEDGDLKMLAGTDSETFQLPSSRTGILTPETETEMVISNTLHGIRHGLRESRI 350

  Fly  1259 ---------LWHGSLTWASWKILLLLVAFIVC---PPVWIGFTFPMGHKFNKVP---IIKFMSYL 1308
                     |.:...|.....:|:..|.| .|   ||   |..:..||...|..   .:.|..:.
plant   351 KEKEMQSEALQNARNTITVVAVLIASVTF-TCGLNPP---GGVYQDGHFIGKATAGGTVAFKVFS 411

  Fly  1309 TSH-IYLMIHLSIVGITPIYPVLRLSLVPYWYE--------VGLLIWLSGLLLFE-------LTN 1357
            .|: |.|...|.||       :|.||::|:..:        ...:|||:.:.:..       :|.
plant   412 VSNSIALFTSLCIV-------ILLLSIIPFRTKSLKTFLIITHKMIWLAVIAMASAYVAGTCVTL 469

  Fly  1358 PSDKSGLGSIK-VLVLLLGMAGVGVHVSAFLFV 1389
            |..:.....:| .||:...|.|     ..|:|:
plant   470 PHSRGNKWVLKATLVIACVMLG-----GMFIFL 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560
ANK 720..847 CDD:238125
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
Ank_5 779..834 CDD:290568
ANK 787..915 CDD:238125 7/24 (29%)
ANK repeat 792..824 CDD:293786
ANK repeat 861..893 CDD:293786 0/1 (0%)
Ank_4 865..915 CDD:290365 7/24 (29%)
Ank_4 929..995 CDD:290365 19/67 (28%)
ANK repeat 932..972 CDD:293786 11/41 (27%)
ANK 969..1096 CDD:238125 30/129 (23%)
ANK repeat 974..1007 CDD:293786 10/32 (31%)
Ank_2 979..1074 CDD:289560 25/97 (26%)
ANK repeat 1009..1041 CDD:293786 7/34 (21%)
ANK 1039..1159 CDD:238125 21/119 (18%)
ANK repeat 1043..1074 CDD:293786 9/30 (30%)
Ank_2 1048..1135 CDD:289560 15/86 (17%)
ANK repeat 1076..1101 CDD:293786 1/24 (4%)
ANK repeat 1109..1134 CDD:293786 5/24 (21%)
Ion_trans <1393..1598 CDD:278921
AT5G50140NP_199825.1 ANK 25..159 CDD:238125 36/133 (27%)
ANK repeat 26..58 CDD:293786 9/31 (29%)
Ank_4 27..81 CDD:290365 16/53 (30%)
ANK repeat 60..106 CDD:293786 12/45 (27%)
ANK 104..220 CDD:238125 33/161 (20%)
Ank_2 113..208 CDD:289560 25/96 (26%)
ANK repeat 145..177 CDD:293786 7/32 (22%)
PGG 357..468 CDD:290670 26/121 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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