DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompC and ACD6

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:NP_567430.1 Gene:ACD6 / 827085 AraportID:AT4G14400 Length:670 Species:Arabidopsis thaliana


Alignment Length:706 Identity:144/706 - (20%)
Similarity:266/706 - (37%) Gaps:178/706 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   783 GANIDATDDLGQKPIHVAAQNNYSEVAKLFLQQHPSLVNATSKDGNTCAHIAAMQGSVKVIEELM 847
            |.:::.|.:     |.....|...|..:........:....|..|::..||||..|.:::::|::
plant    62 GEDVEMTPE-----IFGGMSNGEKECLEKLRSNGTPMERVKSNTGDSILHIAAKWGHLELVKEII 121

  Fly   848 KFDRSGVISARNKLTDATPLQLAAEGGHADVVKALV----RAGASCTEENKAGFTAVHLAAQNGH 908
             |:...::..:|. :..|||.:|..|||..||:|||    .|.||.:.|...|.        |.|
plant   122 -FECPCLLFEQNS-SRQTPLHVATHGGHTKVVEALVASVTSALASLSTEESEGL--------NPH 176

  Fly   909 GQVLDVLKSTNSLRINSKKLGLTPLHVAAYYGQADTVRELLTSVPATVKSETPTGQSLFGDLGTE 973
                 |||..:.             :.|.||.......|:.|.: .....:.|.       ||..
plant   177 -----VLKDEDG-------------NTALYYAIEGRYLEMATCL-VNADKDAPF-------LGNN 215

  Fly   974 SGMTPLHLAAFSGN--ENVVRLLLNSAGVQVDA--------ATIENGYNPLHLACFGGHMSVVGL 1028
            .|::.|:.|..:||  |::|:.:|.:....||.        :.::...:..|:|.....:.|:.:
plant   216 KGISSLYEAVDAGNKFEDLVKAILKTTDDNVDREVRKFNLDSKLQGNKHLAHVALKAKSIGVLDV 280

  Fly  1029 LLSRSAELLQSQDRNGRTGLHIAAMHGHIQ-MVEILLGQGAEINATDRNGWTPLHCAAKAGHLEV 1092
            :|.....|:..||.:|||.|...|..|:.: :..||......:...|::|..|:|.|||..|.|:
plant   281 ILDEYPSLMDEQDEDGRTCLSYGASIGYYKGLCNILNRSTKGVYVCDQDGSFPIHSAAKNEHYEI 345

  Fly  1093 VKLLCEAGASPKSETNYGCAAIWFAASEGHNEVLRYLMNKEHDT----YGLMEDKRFVYNLMVVS 1153
            :|...:...:.|...|.....|...|::....:..|::..:.||    .|...|.....:|.|::
plant   346 IKEFIKRCPASKYLLNRLGQNILHVAAKNEASLTAYMLMHDKDTKHLGVGQDVDGNTPLHLAVMN 410

  Fly  1154 KNHNNKPIQEFVLVSPAPVDTAAKLSNIYIVLSTKEKERAKDLVAAGKQCEAMATELLALA---- 1214
            .:.::             :...|..::..:.|..|...||:|:..:..:...:..|...||    
plant   411 WDFDS-------------ITCLASRNHEILKLRNKSGLRARDIAESEVKPNYIFHERWTLALLLY 462

  Fly  1215 ----AGSDSAGKI-LQAT---DKRNVEFLDVLIENEQKEVIAHTVVQRYLQELWHGSLTWASWKI 1271
                :|.:|...: :|:.   .|:|..:::.|:      |:|..|          .::|:|:   
plant   463 AIHSSGFESVKSLTIQSVPLDPKKNRHYVNALL------VVAALV----------ATVTFAA--- 508

  Fly  1272 LLLLVAFIVCPPVWIGFTFPMGH-KFNKVPIIKFMSYLTS---HIYLMIHLSIVGITPIYPVLRL 1332
                           |||.|.|: ..:|.|.:...:..|:   .|:|:..:             |
plant   509 ---------------GFTIPGGYISDSKKPNLGRATLATNPTLFIFLLFDI-------------L 545

  Fly  1333 SLVPYWYEVGLLIWLSGLLLFELTNPSDKSGLGSIKVLVLLLGMAGVGVHVSAFLFVSKEYWPTL 1397
            ::......:..|||               :.||.:.:::..|       ||:.         |.|
plant   546 AMQSSVATICTLIW---------------AQLGDLALILKSL-------HVAL---------PLL 579

  Fly  1398 VYCRNQCFALAFLLACVQILDFLSFHHLFGPWAIIIGDLLKDLARFLAVLAIFVFG 1453
            ::.. .|..:|||...:..:..:.:  |....:||.|...        :.|||:.|
plant   580 LFSL-LCMPVAFLFGVITAIAHVKW--LLVTISIISGGFF--------LFAIFILG 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560 1/6 (17%)
ANK 720..847 CDD:238125 13/63 (21%)
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786 1/6 (17%)
Ank_5 779..834 CDD:290568 8/50 (16%)
ANK 787..915 CDD:238125 33/131 (25%)
ANK repeat 792..824 CDD:293786 3/31 (10%)
ANK repeat 861..893 CDD:293786 15/35 (43%)
Ank_4 865..915 CDD:290365 19/53 (36%)
Ank_4 929..995 CDD:290365 15/67 (22%)
ANK repeat 932..972 CDD:293786 7/39 (18%)
ANK 969..1096 CDD:238125 37/137 (27%)
ANK repeat 974..1007 CDD:293786 10/42 (24%)
Ank_2 979..1074 CDD:289560 24/105 (23%)
ANK repeat 1009..1041 CDD:293786 5/31 (16%)
ANK 1039..1159 CDD:238125 31/124 (25%)
ANK repeat 1043..1074 CDD:293786 8/31 (26%)
Ank_2 1048..1135 CDD:289560 20/87 (23%)
ANK repeat 1076..1101 CDD:293786 9/24 (38%)
ANK repeat 1109..1134 CDD:293786 3/24 (13%)
Ion_trans <1393..1598 CDD:278921 14/61 (23%)
ACD6NP_567430.1 ANK 97..239 CDD:238125 47/177 (27%)
ANK repeat 101..132 CDD:293786 8/31 (26%)
Ank_2 105..208 CDD:289560 35/131 (27%)
ANK repeat 134..180 CDD:293786 21/58 (36%)
ANK repeat 182..209 CDD:293786 5/40 (13%)
Ank_2 267..352 CDD:289560 25/84 (30%)
ANK 290..419 CDD:238125 31/141 (22%)
ANK repeat 329..361 CDD:293786 10/31 (32%)
Ank_2 334..426 CDD:289560 19/104 (18%)
ANK repeat 363..397 CDD:293786 6/33 (18%)
PGG 506..594 CDD:290670 26/150 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X100
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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