DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompC and TRPC6

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:NP_004612.2 Gene:TRPC6 / 7225 HGNCID:12338 Length:931 Species:Homo sapiens


Alignment Length:949 Identity:206/949 - (21%)
Similarity:353/949 - (37%) Gaps:293/949 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   946 RELLTSVPATVKSETPTGQSL----FGDLGTESGMTPLHLAAFSGNENVVRLLL---NSAGVQ-V 1002
            |.|....||.:.|:..|..|:    |.|            ||..||..|||.:|   :|..|. |
Human    77 RRLANRGPAYMFSDRSTSLSIEEERFLD------------AAEYGNIPVVRKMLEECHSLNVNCV 129

  Fly  1003 DAATIENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTGLHIAAMHGHIQMVEILLGQG 1067
            |..    |.|.|.||....|:.:..|||.:     ::..|.| ..|.:|...|::::||.:|...
Human   130 DYM----GQNALQLAVANEHLEITELLLKK-----ENLSRVG-DALLLAISKGYVRIVEAILSHP 184

  Fly  1068 A-------------------EINATDRNGW------TPLHCAAKAGHLEVVKLLCEAGASPKSET 1107
            |                   :..|.|.:|.      ||:..||.....|:|..|...||..:...
Human   185 AFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRKGARIERPH 249

  Fly  1108 NYGCAAIWFAASEGHNEVLRYLMNKEHDTYGLMEDKRFVYNLMVVSKNHNNKPIQEFV-LVSPA- 1170
            :|.|..         |:..:   .::||::                 :|:...|..:. |.||| 
Human   250 DYFCKC---------NDCNQ---KQKHDSF-----------------SHSRSRINAYKGLASPAY 285

  Fly  1171 -------PVDTAAKLSNIYIVLSTKEKERAKDLVAAGKQCEAMATELLALAAGSDSAGKI----- 1223
                   ||.||.:|||...||:..|||...|......||:.....||.|...::....|     
Human   286 LSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDV 350

  Fly  1224 --LQATD--KRNVEFLDVLIENEQKEVIAHTVVQRYLQELWHGSLTWASWKILLLLVAFIVCPPV 1284
              ||:.|  :.|:..|.:.|:.|.|:.:||...|:.|..:|:.:|  :..:...:.|.|:|...|
Human   351 ETLQSGDHGRPNLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENL--SGLRQQTMAVKFLVVLAV 413

  Fly  1285 WIGFTF-----------PMGHKFNKVPIIKFMSYLTSHIYLMIHLSIVGI------TPIYP---- 1328
            .||..|           .|| |..:.|.:||:::..| ..:.:.|.::..      |.:.|    
Human   414 AIGLPFLALIYWFAPCSKMG-KIMRGPFMKFVAHAAS-FTIFLGLLVMNAADRFEGTKLLPNETS 476

  Fly  1329 ------VLRLSLVPY-WYEVGLLIWLSGLL---------------LFELTNPSDKSGLGSIKVLV 1371
                  :.|:....: |.|:.::.|:.|::               ||||.|..|   .|.:.:..
Human   477 TDNAKQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLD---FGMLAIFA 538

  Fly  1372 LLLGMAGVGVHVSAFLFVSK-----------------------EYW-----------PTLVYCRN 1402
                 |.......||...||                       :|:           |.::  ..
Human   539 -----ASFIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQII--SE 596

  Fly  1403 QCFALAFLLACVQILDFLSFHHLFGPWAIIIGDLLKDLARFLAV-LAIFV------FGFSMHIVA 1460
            ..:|:|.:|:..:|...|..:..|||..|.:|..:||:.:|:.: :.:||      |....:.:.
Human   597 GLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIG 661

  Fly  1461 LNQSFANFSPEDLRSFEKKNRNRGYFSDDDMPTPRPPPVENYVDSRFSEFRRKHKDDLRMHPINS 1525
            ..|:.|..:.|:                                                    |
Human   662 AKQNEAFTTVEE----------------------------------------------------S 674

  Fly  1526 FELLFFAVFGQTTTEQTQVDKIKNVATPTQPYWVEYLFKIVFGIYMLVSVVVLINLLIAMMSDTY 1590
            |:.||:|:||        :.::|:|.......::|.:..:::|:|.:..|:||:|:||||::.::
Human   675 FKTLFWAIFG--------LSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSF 731

  Fly  1591 QRIQAQSDIEWKFGLSKL-IRNMHRTTTAPSPLNLV----TTWFM------WIVE---------K 1635
            |.|:..:|:||||..:|| ........|.|.|.|||    :.:::      ||.|         :
Human   732 QEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLKLKKWISELFQGHKKGFQ 796

  Fly  1636 VKARMKKKKRPSLVQMMGIRQASPRTKAGAKWLSKIKKDSVALSQ-VHLSPLGSQASFSQANQNR 1699
            ..|.|.|......:.::|..:...:.....|.:...|:.|:..|: .||:...:.....|....|
Human   797 EDAEMNKINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFHLNSFNNPPRQYQKIMKR 861

  Fly  1700 IENVADWEAIAKKY--RALVGDEEGGSLKDSDAESGSQE 1736
                     :.|:|  :|.: |:|...:.:.:.:...|:
Human   862 ---------LIKRYVLQAQI-DKESDEVNEGELKEIKQD 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560
ANK 720..847 CDD:238125
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
Ank_5 779..834 CDD:290568
ANK 787..915 CDD:238125
ANK repeat 792..824 CDD:293786
ANK repeat 861..893 CDD:293786
Ank_4 865..915 CDD:290365
Ank_4 929..995 CDD:290365 16/52 (31%)
ANK repeat 932..972 CDD:293786 9/29 (31%)
ANK 969..1096 CDD:238125 40/155 (26%)
ANK repeat 974..1007 CDD:293786 12/36 (33%)
Ank_2 979..1074 CDD:289560 31/117 (26%)
ANK repeat 1009..1041 CDD:293786 9/31 (29%)
ANK 1039..1159 CDD:238125 27/144 (19%)
ANK repeat 1043..1074 CDD:293786 9/49 (18%)
Ank_2 1048..1135 CDD:289560 22/111 (20%)
ANK repeat 1076..1101 CDD:293786 8/30 (27%)
ANK repeat 1109..1134 CDD:293786 3/24 (13%)
Ion_trans <1393..1598 CDD:278921 43/222 (19%)
TRPC6NP_004612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
trp 82..897 CDD:273311 204/944 (22%)
ANK 1 97..126 11/40 (28%)
ANK 2 132..161 9/37 (24%)
ANK repeat 132..159 CDD:293786 9/35 (26%)
ANK repeat 161..185 CDD:293786 7/24 (29%)
ANK 3 163..189 7/25 (28%)
ANK repeat 212..247 CDD:293786 10/34 (29%)
ANK 4 218..247 9/28 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.