DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompC and TRPC3

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:XP_011530519.1 Gene:TRPC3 / 7222 HGNCID:12335 Length:937 Species:Homo sapiens


Alignment Length:909 Identity:210/909 - (23%)
Similarity:354/909 - (38%) Gaps:248/909 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   966 LFGDLGTESGMTPLHL--AAFSGNENVVRLLL-NSAGVQVDAATIENGYNPLHLACFGGHMSVVG 1027
            :|.|.||.........  ||..||..|||.:| .|..:.|:.... .|.|.|.||....|:.|  
Human   101 MFNDRGTSLTAEEERFLDAAEYGNIPVVRKMLEESKTLNVNCVDY-MGQNALQLAVGNEHLEV-- 162

  Fly  1028 LLLSRSAELLQSQDRNGRTG--LHIAAMHGHIQMVEILLG-------------------QGAEIN 1071
                  .|||..::...|.|  |.:|...|::::||.:|.                   |..:..
Human   163 ------TELLLKKENLARIGDALLLAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFY 221

  Fly  1072 ATDRNGW------TPLHCAAKAGHLEVVKLLCEAGASPKSETNYGCAAIWFAASEGHNEVLRYLM 1130
            |.|.:|.      ||:..||.....|||.:|...||..:...:|.|..       |.      .|
Human   222 AYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGARIERPHDYFCKC-------GD------CM 273

  Fly  1131 NKE-HDTYGLMEDKRFVYNLMVVSKNHNNKPIQEFV-LVSPA--------PVDTAAKLSNIYIVL 1185
            .|: ||::                 :|:...|..:. |.|||        ||.||.:|||....|
Human   274 EKQRHDSF-----------------SHSRSRINAYKGLASPAYLSLSSEDPVLTALELSNELAKL 321

  Fly  1186 STKEKERAKDLVAAGKQCEAMATELLALAAGSDSAGKILQATDKRNVEFLDV------------L 1238
            :..|||...|......||:.....:|.|...|:....||.. |..:.|.|:|            .
Human   322 ANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNG-DLESAEPLEVHRHKASLSRVKLA 385

  Fly  1239 IENEQKEVIAHTVVQRYLQELWHGSLT-----WASWKILLLLVAFIVCPPVWIGFTFPMGHKFNK 1298
            |:.|.|:.:||...|:.|..:|:.:|:     ..:.|.|::||..:..|.:.||:......:..|
Human   386 IKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVLVVALGLPFLAIGYWIAPCSRLGK 450

  Fly  1299 V---PIIKFMSYLTSHIYLMIHLSIV---------GITPI-------YP--VLRLSLVPY-WYEV 1341
            :   |.:||:::..|.|   |.|.::         |||.:       ||  :.|:....: |.|:
Human   451 ILRSPFMKFVAHAASFI---IFLGLLVFNASDRFEGITTLPNITVTDYPKQIFRVKTTQFTWTEM 512

  Fly  1342 GLLIWLSGLL---------------LFELTNPSDKSGLGSIKVLVLLLGMAGVGVHVSAFLFVSK 1391
            .:::|:.|::               :.:|.|..|   .|.:.:.:     |.......|||..:|
Human   513 LIMVWVLGMMWSECKELWLEGPREYILQLWNVLD---FGMLSIFI-----AAFTARFLAFLQATK 569

  Fly  1392 --EYWPTLV------------------YCRNQ------------CFALAFLLACVQILDFLSFHH 1424
              :|..:.|                  |.|::            .:|:|.:|:..:|...|..:.
Human   570 AQQYVDSYVQESDLSEVTLPPEIQYFTYARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANE 634

  Fly  1425 LFGPWAIIIGDLLKDLARFLAVLAIFVFGFSMHIVALNQSFANFSPEDLRSFEKKNRNRGYFSDD 1489
            .|||..|.:|..:||:.:|:.:..:..|.|.:.:..|...:....                    
Human   635 SFGPLQISLGRTVKDIFKFMVLFIMVFFAFMIGMFILYSYYLGAK-------------------- 679

  Fly  1490 DMPTPRPPPVENYVDSRFSEFRRKHKDDLRMHPINSFELLFFAVFGQTTTEQTQVDKIKNVATPT 1554
                         |::.|:...            .||:.||:::||        :.::.:|....
Human   680 -------------VNAAFTTVE------------ESFKTLFWSIFG--------LSEVTSVVLKY 711

  Fly  1555 QPYWVEYLFKIVFGIYMLVSVVVLINLLIAMMSDTYQRIQAQSDIEWKFGLSKL-IRNMHRTTTA 1618
            ...::|.:..:::|||.:..||||:|:||||::.:||.|:..||:||||..||| :.......|.
Human   712 DHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTL 776

  Fly  1619 PSPLNLVTT------WFMWIVEKVKARMKKKKRPSLVQMMGIRQASPR-TKAGAKWLSKIKKDSV 1676
            |.|.:||.:      :.|.||...|.|.::.::..   .||:..:..| ||.....|:.:::..:
Human   777 PPPFSLVPSPKSFVYFIMRIVNFPKCRRRRLQKDI---EMGMGNSKSRFTKCFPVHLNLMQRCEL 838

  Fly  1677 ALSQVHLSPLGSQASF-SQANQ-NRIENVADWEAIAKKY--RALVGDEEGGSLKDSDAESGSQE 1736
            .|.....|.:....|| |..|| .|.:.:  .:.:.|:|  :|.| |:|...:.:.:.:...|:
Human   839 NLFTQSNSRVFESHSFNSILNQPTRYQQI--MKRLIKRYVLKAQV-DKENDEVNEGELKEIKQD 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560
ANK 720..847 CDD:238125
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
Ank_5 779..834 CDD:290568
ANK 787..915 CDD:238125
ANK repeat 792..824 CDD:293786
ANK repeat 861..893 CDD:293786
Ank_4 865..915 CDD:290365
Ank_4 929..995 CDD:290365 11/30 (37%)
ANK repeat 932..972 CDD:293786 2/5 (40%)
ANK 969..1096 CDD:238125 42/156 (27%)
ANK repeat 974..1007 CDD:293786 10/35 (29%)
Ank_2 979..1074 CDD:289560 30/118 (25%)
ANK repeat 1009..1041 CDD:293786 10/31 (32%)
ANK 1039..1159 CDD:238125 30/147 (20%)
ANK repeat 1043..1074 CDD:293786 10/51 (20%)
Ank_2 1048..1135 CDD:289560 25/112 (22%)
ANK repeat 1076..1101 CDD:293786 9/30 (30%)
ANK repeat 1109..1134 CDD:293786 5/25 (20%)
Ion_trans <1393..1598 CDD:278921 45/234 (19%)
TRPC3XP_011530519.1 trp 96..906 CDD:273311 210/909 (23%)
ANK 119..253 CDD:238125 39/142 (27%)
ANK repeat 146..177 CDD:293786 11/38 (29%)
ANK repeat 226..261 CDD:293786 11/34 (32%)
TRP_2 267..326 CDD:285535 20/88 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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