DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompC and tnksb

DIOPT Version :10

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:XP_005171800.1 Gene:tnksb / 567533 ZFINID:ZDB-GENE-030131-4865 Length:1284 Species:Danio rerio


Alignment Length:1175 Identity:274/1175 - (23%)
Similarity:435/1175 - (37%) Gaps:337/1175 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 LVSSRQTGTATNILRALLAAAGKDIRLKADGRGKIPLLLAVESG----NQSMCRELLAAQTAEQL 261
            |:|...||.|......:.:||.......:..| ..|:..|...|    ..|.|..:.::.||...
Zfish    42 LLSPSATGAAECGASTMESAAASSASASSPDR-PAPVTAAAAGGPSVLGSSSCSSISSSATAGSQ 105

  Fly   262 ---KATTANGDTA---------LHLAARRRDVDMVRILVDYGTNVDTQN--GEGQTPLHIAAAEG 312
               ....:.|:..         |..|.|..||..|:.||| ..||:.::  |...||||.||..|
Zfish   106 SPGSGAASPGEAVCGAGGAFRELFEACRNGDVSRVKRLVD-SVNVNAKDMAGRKSTPLHFAAGFG 169

  Fly   313 DEALLKYFYGVRASASIADNQDRTPMHLAAENGHAHVIEIL----ADKFKASIFERTKD--GSTL 371
            .:.::::.....|:....|:....|:|.|...|||.|:.:|    ||       ...:|  ..|.
Zfish   170 RKDVVEHLLQTGANVHSRDDGGLIPLHNACSFGHAEVVSLLLCSGAD-------PNARDNWNYTP 227

  Fly   372 MHIASLNGHAECATMLFKKGVYLHMPNKDGARSIHTAAAYGHTGIINTLLQKGEKVDVTTNDN-- 434
            :|.|::.|..:...:|.:.|...::.|.||..::..|.....| ::....:|.|.::...:.|  
Zfish   228 LHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSALDLADPSAKT-VLTGEYKKDELLEAARSGNEE 291

  Fly   435 ---------------------------YTALHIAVESAKPAVVETLLGFGADVHV--RGGKLRET 470
                                       .|.||:|....:..:|:.||.:|||||.  :||.:   
Zfish   292 KLMALLTPLNVNCHASDGRKSTSQKMLSTPLHLAAGYNRVRIVQLLLQYGADVHAKDKGGLV--- 353

  Fly   471 PLHIAARVKDGDRCAL-------MLLKSGASPNLTTDDCLTPVHVAARHGNLATLMQLLEDEGDP 528
            |||.|        |:.       :|||.||..|.......||:|.||....:.....||....||
Zfish   354 PLHNA--------CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP 410

  Fly   529 LYKSNTGETPLHMACRACHPDIVRHL---------------IETVKEKHGPDKATTYINSVNEDG 578
            ...:..|::.:.:|..   |::...|               .:..|.|....:..::.:..:.| 
Zfish   411 TLLNCHGKSAVDVAPT---PELKERLTYEFKGHSLLQAAREADMAKVKKTAQEIISFKHPHSHD- 471

  Fly   579 ATALHYTCQITKEEVKIPESDKQIVRMLLENGADVTLQTKTALETAFHYCAVAGNNDVLMEMISH 643
             :|||  |.:.....|    .||:..:||..||::..:.|..: |.||..|..|:||||      
Zfish   472 -SALH--CAVASPHPK----RKQVTELLLRKGANIHEKNKDFM-TPFHVAAERGHNDVL------ 522

  Fly   644 MNPTDIQKAMNRQSSVGWTPLLIACHRGHMELVNNLLANH-ARVDVFDTEGRSALHLAAERGYLH 707
                                              .:|..| |:|:..||.|::|||.||..|::.
Zfish   523 ----------------------------------EVLQKHGAKVNAADTLGQTALHRAALAGHIQ 553

  Fly   708 VCDALLTNKAFINSKSRVGRTALHL--------------------------AAMNGFTHLVKFLI 746
            .|..||:..|..:..|..|.||..:                          ||..|....||.|.
Zfish   554 TCRLLLSYGADPSIVSLQGFTASQMGNEAVQQILNENVPPRNSDVDYRLLEAAKAGDLDTVKQLC 618

  Fly   747 KDHNAVIDILTLRKQTPLHLAAASGQMEVCQLLLELGANIDATDDLGQKPIHVAAQNNYSEVAKL 811
            ...|.....|..|..||||.||...::.|.:.||..||::.|.|..|..|:|.|....:.|||:|
Zfish   619 SPQNVNCRDLEGRHSTPLHFAAGYNRVAVVEYLLHHGADVHAKDKGGLVPLHNACSYGHYEVAEL 683

  Fly   812 FLQQHPSLVNATSKDGNTCAHIAAMQGSVKVIEELMKFDRSGVISARNKLTDATPLQLAAEGGHA 876
             |.:|.:.||                     :.:|.||               |||..||..|..
Zfish   684 -LVRHGASVN---------------------VADLWKF---------------TPLHEAAAKGKY 711

  Fly   877 DVVKALVRAGASCTEENKAGFTAVHLAAQNGHGQVLDVLKSTNSLRINSKKLGLTPLHVAAYYGQ 941
            ::.|.|::.||..:::|:.|..|:.: .::|...:.|:|:...:|...:||            |.
Zfish   712 EICKLLLKHGADPSKKNRDGNMALDM-VKDGDTDIQDLLRGDAALLDAAKK------------GC 763

  Fly   942 ADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLHLAAFSGNENVVRLLLNSAGVQVDAAT 1006
            ...|::|.:  |..:......|::          .|||||||                       
Zfish   764 LARVQKLCS--PENINCRDTQGRN----------STPLHLAA----------------------- 793

  Fly  1007 IENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTGLHIAAMHGHIQMVEILLGQGAEIN 1071
               |||.|.:|.:         ||...|: :.:||:.|...||.||.:||:.:..:|:.....:|
Zfish   794 ---GYNNLEVAEY---------LLEHGAD-VNAQDKGGLIPLHNAASYGHVDIAALLIKFNTCVN 845

  Fly  1072 ATDRNGWTPLHCAAKAGHLEVVKLLCEAGASPKSETNYGCAAIWFAASEGHNEVLRYLMNKEHDT 1136
            |||:..:||||.||:.|..::..||...||:|..:...|..|:..|.::              |.
Zfish   846 ATDKWAFTPLHEAAQKGRTQLCALLLAHGANPTMKNQEGQTALDLATAD--------------DI 896

  Fly  1137 YGLMEDKR--------FVYNLMVVSKNHNNKPIQEFVLVSPAP----VDTAAKLSNIYIVLSTKE 1189
            ..|:.|..        |.....|:|.          .|:|||.    :..|:.:.|:        
Zfish   897 RALLMDAMPPDALPSCFKPQATVLSA----------ALISPASTPSCLSAASSIDNL-------- 943

  Fly  1190 KERAKDLVAAGKQCEAMATELLALAAGSDSAGKILQATDKRNVEFLDVLIENEQKEVIAHTVVQR 1254
                     ||..|:..:......|.|:.|       ||::..:  ..||:..:...:....:.:
Zfish   944 ---------AGPLCDGASGGAAGPADGASS-------TDRKEGD--GALIQGNKLTAVLDMNISQ 990

  Fly  1255 YLQEL 1259
            :|:.|
Zfish   991 FLKSL 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANKYR <125..371 CDD:440430 48/193 (25%)
ANK repeat 129..157 CDD:293786
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786 8/39 (21%)
ANK repeat 267..298 CDD:293786 12/39 (31%)
ANKYR 281..572 CDD:440430 82/351 (23%)
ANK repeat 300..331 CDD:293786 8/30 (27%)
ANK repeat 367..398 CDD:293786 7/32 (22%)
ANK repeat 400..431 CDD:293786 6/30 (20%)
ANK repeat 433..463 CDD:293786 13/60 (22%)
ANK repeat 469..499 CDD:293786 11/36 (31%)
ANK repeat 501..532 CDD:293786 9/30 (30%)
ANK repeat 534..575 CDD:293786 6/55 (11%)
ANK repeat 577..616 CDD:293786 12/38 (32%)
Ank_2 599..690 CDD:463710 20/91 (22%)
ANKYR 651..933 CDD:440430 77/308 (25%)
ANK repeat 660..690 CDD:293786 4/30 (13%)
ANK repeat 692..723 CDD:293786 11/30 (37%)
ANK repeat 725..757 CDD:293786 10/57 (18%)
ANK repeat 759..790 CDD:293786 13/30 (43%)
ANK repeat 792..824 CDD:293786 12/31 (39%)
ANKYR 843..1144 CDD:440430 74/300 (25%)
ANK repeat 861..893 CDD:293786 10/31 (32%)
ANK repeat 932..972 CDD:293786 5/39 (13%)
ANK repeat 974..1007 CDD:293786 7/32 (22%)
ANK repeat 1009..1041 CDD:293786 8/31 (26%)
TRPV 1035..1684 CDD:454755 53/237 (22%)
ANK repeat 1043..1074 CDD:293786 10/30 (33%)
ANK repeat 1076..1101 CDD:293786 9/24 (38%)
ANK repeat 1109..1134 CDD:293786 3/24 (13%)
tnksbXP_005171800.1 uvrC <48..>175 CDD:237782 33/128 (26%)
ANKYR 124..450 CDD:440430 84/348 (24%)
ANK repeat 160..188 CDD:293786 8/27 (30%)
ANK repeat 190..221 CDD:293786 10/37 (27%)
ANK repeat 223..254 CDD:293786 6/30 (20%)
ANKYR 277..608 CDD:440430 88/393 (22%)
ANK repeat 320..348 CDD:293786 12/27 (44%)
ANK repeat 350..381 CDD:293786 13/41 (32%)
ANK repeat 383..414 CDD:293786 9/30 (30%)
ANK repeat 471..503 CDD:293786 12/39 (31%)
ANK repeat 505..536 CDD:293786 13/71 (18%)
ANK repeat 538..568 CDD:293786 11/29 (38%)
ANKYR 580..900 CDD:440430 106/431 (25%)
ANK repeat 634..662 CDD:293786 12/27 (44%)
ANK repeat 664..695 CDD:293786 12/52 (23%)
ANK repeat 697..728 CDD:293786 12/45 (27%)
ANK repeat 750..780 CDD:293786 7/43 (16%)
Ank_4 754..805 CDD:372654 20/109 (18%)
ANK repeat 784..815 CDD:293786 15/76 (20%)
ANK repeat 817..848 CDD:293786 10/30 (33%)
ANK repeat 850..881 CDD:293786 12/30 (40%)
SAM_tankyrase1,2 981..1046 CDD:188923 2/15 (13%)
tankyrase_like 1048..1270 CDD:238718
Blue background indicates that the domain is not in the aligned region.

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