DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompC and trpc6a

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:XP_005161247.1 Gene:trpc6a / 563989 ZFINID:ZDB-GENE-040724-114 Length:874 Species:Danio rerio


Alignment Length:905 Identity:201/905 - (22%)
Similarity:341/905 - (37%) Gaps:269/905 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   938 YYGQADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLHL----AAFSGNENVVRLLLNSA 998
            |:|: :..|::|   |.:.:........:|.  |..:.:|||..    ||..||..|||.:|...
Zfish    46 YHGE-NVARQVL---PKSRRQAVRGAAYMFN--GHPNSLTPLEERFLDAAEYGNIPVVRRMLEEL 104

  Fly   999 GVQVDAATIE-NGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTG--LHIAAMHGHIQMV 1060
             .::|...:: .|.|.|.||....|:.|        .|||..:|...|.|  |.:|...|:.::|
Zfish   105 -PELDVNCVDYMGQNALQLAVANEHLEV--------TELLLKKDNLSRIGDALLLAISKGYTRIV 160

  Fly  1061 EILLGQGA------------------EINATDRNGW------TPLHCAAKAGHLEVVKLLCEAGA 1101
            |.:|...|                  :..|.|.:|.      ||:..|:.....|:|.:|...||
Zfish   161 EAILSHKAFADSRRLTASPSQAPMHDDFFAYDEDGTRFSHDVTPVILASHCHEYEIVHILLGKGA 225

  Fly  1102 SPKSETNYGCAAIWFAASEGHNEVLRYLMNKEHDTYGLMEDKRFVYNLMVVSKNHNNKPIQEF-V 1165
            ..:...:|.|..          :...|  ::::|::                 .|:...|..: .
Zfish   226 RIEQPHDYFCTC----------DTCNY--HQKYDSF-----------------CHSRSRINAYRG 261

  Fly  1166 LVSPA--------PVDTAAKLSNIYIVLSTKEKERAKDLVAAGKQCEAMATELLALAAGSDSAGK 1222
            |.|||        ||..|.:|||....|:..|||...:......||:.....||.|...::....
Zfish   262 LASPAYLSLSNEDPVLAALELSNELASLANIEKEFKNEYRKLSMQCKDFVVGLLDLCRSTEEVEA 326

  Fly  1223 ILQATDKRNVEF--------LDVLIENEQKEVIAHTVVQRYLQELWHGSL------TWASWKILL 1273
            ||...:...:|.        |.:.|:.|.|:.:||...|:.|..:|:..|      |.|...:::
Zfish   327 ILNGEEDDTLELPGRPSLIRLKLAIKYELKKFVAHPNCQQQLLSIWYEHLPELRQQTTAIKFLVV 391

  Fly  1274 LLVAF---IVCPPVWIGFTFPMGHKFNKVPIIKFMSYLTSHIYLMIHLSIVGITPI--------- 1326
            |.||.   .:....|:.....|| |..:.|.:||:::..|   ..|.|.::.:...         
Zfish   392 LGVAMGLPFLAMVYWVAPCSKMG-KIMRGPFLKFVAHAAS---FTIFLGLLVMNAADRFDGTKLL 452

  Fly  1327 -------YP--VLRLSLVPY-WYEVGLLIWLSGLLLFE------------LTNPSDKSGLGSIKV 1369
                   ||  :.|:...|: |.|:.::.|:.|::..|            |..|.:....|.:.:
Zfish   453 PNMTIHDYPTQLFRMKTTPFTWMEMLIISWVIGMIWAECKEIWSQGPREYLLEPWNLLDFGMLAI 517

  Fly  1370 LVLLLGMAGVGVHVSAF-------LFVSKEY---------------------W----PTLVYCRN 1402
            .|     |.....:.||       .:|.:.|                     |    |.||  ..
Zfish   518 FV-----ASFISRIMAFWHASSAQRYVDEHYTDLTNVVLPFEVGYFQRARIDWLPSDPQLV--SE 575

  Fly  1403 QCFALAFLLACVQILDFLSFHHLFGPWAIIIGDLLKDLARFLAVLAIFVFGFSMHIVALNQSFAN 1467
            ..:|:|.:|:..:|...|..:..|||..|.:|..:||:.:|:.:..:....|.:           
Zfish   576 GLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFILVFLAFMI----------- 629

  Fly  1468 FSPEDLRSFEKKNRNRGYFSDDDMPTPRPPPVENYVDSRFSEFRRKHKDDLRMHPINSFELLFFA 1532
                            |.|                  :.:|.:|...:::.......||:.||:|
Zfish   630 ----------------GMF------------------NLYSYYRGAKQNEAFTTVEESFKTLFWA 660

  Fly  1533 VFGQTTTEQTQVDKIKNVATPTQPYWVEYLFKIVFGIYMLVSVVVLINLLIAMMSDTYQRIQAQS 1597
            :||        :.::|:|.......::|.:..:::|:|.:..|:||:|:||||:::::|.|:..:
Zfish   661 IFG--------LSEVKSVVVNNGHKFIENIGYVLYGVYNVTVVIVLLNMLIAMINNSFQEIEDDA 717

  Fly  1598 DIEWKFGLSKL-IRNMHRTTTAPSPLNLVTTWFMWIVEKVKARMKKKKRPSLVQMMGI----RQA 1657
            |:||||..:|| ........|.|.|.||:.:              .|...|||  ||:    |:.
Zfish   718 DVEWKFARAKLWFTYFEEGRTLPVPFNLIPS--------------PKSVLSLV--MGVKGLLREL 766

  Fly  1658 SPRTKAGAKWLSKIKKDSVALSQVHLSPLGSQASFSQA----NQNRIENVADWEAIAKKY 1713
            |.|.||       |.|.|      .||.|| |:...||    ..:|.:.:  .:.:.|:|
Zfish   767 SVRQKA-------IMKGS------ELSELG-QSKTCQAKTLPRSSRYQKI--MKRLVKRY 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560
ANK 720..847 CDD:238125
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
Ank_5 779..834 CDD:290568
ANK 787..915 CDD:238125
ANK repeat 792..824 CDD:293786
ANK repeat 861..893 CDD:293786
Ank_4 865..915 CDD:290365
Ank_4 929..995 CDD:290365 17/60 (28%)
ANK repeat 932..972 CDD:293786 6/33 (18%)
ANK 969..1096 CDD:238125 41/157 (26%)
ANK repeat 974..1007 CDD:293786 12/36 (33%)
Ank_2 979..1074 CDD:289560 31/119 (26%)
ANK repeat 1009..1041 CDD:293786 10/31 (32%)
ANK 1039..1159 CDD:238125 26/145 (18%)
ANK repeat 1043..1074 CDD:293786 10/50 (20%)
Ank_2 1048..1135 CDD:289560 21/110 (19%)
ANK repeat 1076..1101 CDD:293786 7/30 (23%)
ANK repeat 1109..1134 CDD:293786 3/24 (13%)
Ion_trans <1393..1598 CDD:278921 45/229 (20%)
trpc6aXP_005161247.1 trp 65..841 CDD:273311 196/882 (22%)
ANK repeat 76..113 CDD:293786 12/37 (32%)
ANK 88..221 CDD:238125 37/141 (26%)
ANK repeat 115..146 CDD:293786 12/38 (32%)
ANK repeat 194..228 CDD:293786 9/33 (27%)
TRP_2 235..294 CDD:285535 16/87 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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