DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompC and mask

DIOPT Version :10

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:NP_001247280.1 Gene:mask / 50070 FlyBaseID:FBgn0043884 Length:4010 Species:Drosophila melanogaster


Alignment Length:1326 Identity:292/1326 - (22%)
Similarity:474/1326 - (35%) Gaps:354/1326 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GGRGGGRGGGVGRKT----PSSLTGPPDESATPSERATPASKADSDPKDDSSSNGDKKDMDLFPA 66
            ||..|..|||.|..|    |:|:|.....||.....|..::.:.:.|..::.:|..........|
  Fly   162 GGGSGSSGGGGGSTTVIANPASVTNTGAGSAAKFRAAVASAPSPALPATNAPANATAAAAIAAIA 226

  Fly    67 PKP-PSAGASIRDTANKVLG--LAMKSEWTPIEAELKKLEKYVAN----VGEDGNHIPL------ 118
            ..| ||:.:|...::.|...  .|:|.     :..|::.:....|    ..:|..|:..      
  Fly   227 TAPAPSSSSSSSSSSKKTRAAVAALKR-----QVALQQQQPVTGNAPNMTSKDSAHLKFATTTLL 286

  Fly   119 ----AGVHDMNTGMTPLMYATKDNKTAIMDRMIELGADVGARN--NDNYNVLHIAAMYSREDVVK 177
                |...|.|.|.     |...:..........:||..|||.  |...::.:.|.:      :|
  Fly   287 MGAAAAAADSNAGA-----ALGGSGAGGSGSSSSVGAVGGARMALNPAVDMANAAVL------LK 340

  Fly   178 LLLTKRGVDPFSTGGSRSQTAVHLVSSRQTGTATNILRALLAAAGKDIRLKADGRGKI---PLLL 239
            ..|........::..:||.|:....::....::..|:.|:.:|....|....|...:.   |:..
  Fly   341 QKLKDAAAAASASASNRSATSSMSSTASSLSSSAGIVNAISSALQNIITPDTDTDTEFYPQPVTT 405

  Fly   240 AVESGNQSMCRELLAA------QTAEQLKATTANGDTALHLAARRRDVDMVRILVDYGTNVDTQN 298
            .:....:....|:|.|      ...:.:  ..::.|:..|....|.|.|...     ..:.|:..
  Fly   406 DLSESEEESVSEILLAFLCLRPDLLDDI--PESDPDSCPHEGEVREDEDETE-----EESEDSDE 463

  Fly   299 GEGQTPLHIAAAEGDEALLKYFYGVRASASIADNQDR-------TPMHLAAENGHAHVIEIL--- 353
            .||:      ..|.||..:.......|.....|::|.       :...|.|.|..:..|..|   
  Fly   464 SEGE------EEEEDEEEIDVLQDNDADDEEIDDEDEEEDAPEVSSFLLDANNKRSSNISALLEA 522

  Fly   354 ADKFKASI-------FERTKDGSTLMHIASLNGHAECATMLFKKGVYLHMP-NKDG-ARSIHTAA 409
            |...||.:       .:.||...|.|..||                   .| :|:| :||:..|.
  Fly   523 AANEKAPVLRHATHAIDETKQALTKMRCAS-------------------SPRDKNGFSRSLVAAC 568

  Fly   410 AYGHTGIINTLLQKG----EKVDVTTNDNYTALHIAVESAKPAVVETLLGFGADVHVRGGKLRET 470
            .......:..||.||    .....:|:|..:.|.:|..:....:.:.||...             
  Fly   569 TDNDVNTVKRLLCKGNVNLNDAAASTDDGESLLSMACSAGYYELAQVLLAMS------------- 620

  Fly   471 PLHIAARVKDGDRCALMLLKSGASPNLTTDDCLTPVHVAARHGNLATLMQLLEDEGDPLYKSNTG 535
                ||:|:|          .|...:       ||:..||..|:|..:..||....|......||
  Fly   621 ----AAQVED----------KGQKDS-------TPLMEAASAGHLDIVKLLLNHNADVNAHCATG 664

  Fly   536 ETPLHMACRACHPDIVRHLIETVKEKHGPDKATTYINSVNEDGATALHYTCQITKEEVKIPESDK 600
            .|||..||.....|:|:.|:     |||.:     :...||:|.|.|.........||       
  Fly   665 NTPLMFACAGGQVDVVKVLL-----KHGAN-----VEEQNENGHTPLMEAASAGHVEV------- 712

  Fly   601 QIVRMLLENGADVTLQTKTALETAFHYCAVAGNNDVLMEMISHMNPTDIQKAMNRQSSVGWTPLL 665
              .::|||:||.:...:....|:|                                       |.
  Fly   713 --AKVLLEHGAGINTHSNEFKESA---------------------------------------LT 736

  Fly   666 IACHRGHMELVNNLLANHARVDVFDTEGRSALHLAAERGYLHVCDALLTNKAFINSKSRVGRTAL 730
            :||::||:::|..||...|     |.|              |..|.:              .|||
  Fly   737 LACYKGHLDMVRFLLQAGA-----DQE--------------HKTDEM--------------HTAL 768

  Fly   731 HLAAMNGFTHLVKFLIKDHNAVIDILTLRKQTPLHLAAASGQMEVCQLLLELGANIDATDDLGQK 795
            ..|:|:|...:.:.|: |..|.:::.|...::||.|||..|.:|:..||:|.||||:..:|.|..
  Fly   769 MEASMDGHVEVARLLL-DSGAQVNMPTDSFESPLTLAACGGHVELATLLIERGANIEEVNDEGYT 832

  Fly   796 PIHVAAQNNYSEVAKLFLQQHPSLVNATSKDGNTCAHIAAMQGSVKVIEELMKFDRSGVISARNK 860
            |:..||:..:.|:..|.|.:..::...|.:...|...:|...|.::|...|:|      ..|..:
  Fly   833 PLMEAAREGHEEMVALLLSKGANINATTEETQETALTLACCGGFMEVAAFLIK------EGANLE 891

  Fly   861 LTDATPLQLAAEGGHADVVKALVRAGASCTEENKAGFTAVHLAAQNGHGQVLDVLKSTNSLRINS 925
            |..:|||..|::.||.|:|..|::..|:...|.:.|.||:..|.:|||.....||.|        
  Fly   892 LGASTPLMEASQEGHTDLVSFLLKKKANVHAETQTGDTALTHACENGHTDAAGVLLS-------- 948

  Fly   926 KKLGLTPLHVAAYYGQADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLHLAAFSGNENV 990
                         ||             |.::.|            :|.|.|||..|..:|:...
  Fly   949 -------------YG-------------AELEHE------------SEGGRTPLMKACRAGHLCT 975

  Fly   991 VRLLLNSAGVQVDAATIENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTGLHIAAMHG 1055
            |:.|:.. |..|:..|..|.:..|.|||.|||.|||.|||..:|:.......|. |.|..|:..|
  Fly   976 VKFLIQK-GANVNKQTTSNDHTALSLACAGGHQSVVELLLKNNADPFHKLKDNS-TMLIEASKGG 1038

  Fly  1056 HIQMVEILLGQGAEINATDRNGWTPLHCAAKAGHLEVVKLLCEAGASPKSETNYGCAAIWFAASE 1120
            |.::||:|. :...|:.|:.        ||.|...:         |:|.|.            ..
  Fly  1039 HTRVVELLF-RYPNISPTEN--------AASANVTQ---------AAPTSN------------QP 1073

  Fly  1121 GHNEVLRYLMNK--EHD---------TYGLMEDKRFVYNLMVVSKNHNNKPIQEFVLVSPAPVDT 1174
            |.|::.:.:|.:  :|.         .:.|.|..|        :.|..:...|:|        .:
  Fly  1074 GPNQMRQKIMKQQLQHQLQQLNAPPGLHELSEAAR--------ASNQQHFHQQQF--------SS 1122

  Fly  1175 AAKLSNIYIVLSTKEKERAKDLVAAGKQCEAMATELLALAAGSDSAGKILQATDKRNVEFLDV-- 1237
            |...|:..:.:.|      .|.:.|| :.:..||..::..||:.:.|......:...|..:|:  
  Fly  1123 AGNGSSNIVAMGT------GDFLDAG-ELQLTATAGMSAGAGTSTTGSETGMEEYGEVGGIDLTT 1180

  Fly  1238 LIENEQKEVIA-----HTVVQRYLQE 1258
            |...:|:.:||     |...|:..|:
  Fly  1181 LGAQQQEGLIAKSRLFHLQQQQQQQQ 1206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANKYR <125..371 CDD:440430 48/273 (18%)
ANK repeat 129..157 CDD:293786 5/27 (19%)
ANK repeat 159..186 CDD:293786 3/26 (12%)
ANK repeat 232..265 CDD:293786 4/41 (10%)
ANK repeat 267..298 CDD:293786 6/30 (20%)
ANKYR 281..572 CDD:440430 67/313 (21%)
ANK repeat 300..331 CDD:293786 6/30 (20%)
ANK repeat 367..398 CDD:293786 5/31 (16%)
ANK repeat 400..431 CDD:293786 8/35 (23%)
ANK repeat 433..463 CDD:293786 5/29 (17%)
ANK repeat 469..499 CDD:293786 5/29 (17%)
ANK repeat 501..532 CDD:293786 9/30 (30%)
ANK repeat 534..575 CDD:293786 13/40 (33%)
ANK repeat 577..616 CDD:293786 10/38 (26%)
Ank_2 599..690 CDD:463710 16/90 (18%)
ANKYR 651..933 CDD:440430 75/281 (27%)
ANK repeat 660..690 CDD:293786 9/29 (31%)
ANK repeat 692..723 CDD:293786 3/30 (10%)
ANK repeat 725..757 CDD:293786 9/31 (29%)
ANK repeat 759..790 CDD:293786 14/30 (47%)
ANK repeat 792..824 CDD:293786 7/31 (23%)
ANKYR 843..1144 CDD:440430 79/311 (25%)
ANK repeat 861..893 CDD:293786 11/31 (35%)
ANK repeat 932..972 CDD:293786 4/39 (10%)
ANK repeat 974..1007 CDD:293786 10/32 (31%)
ANK repeat 1009..1041 CDD:293786 15/31 (48%)
TRPV 1035..1684 CDD:454755 47/242 (19%)
ANK repeat 1043..1074 CDD:293786 10/30 (33%)
ANK repeat 1076..1101 CDD:293786 3/24 (13%)
ANK repeat 1109..1134 CDD:293786 3/26 (12%)
maskNP_001247280.1 ANKYR 584..858 CDD:440430 92/399 (23%)
ANK repeat 596..628 CDD:293786 9/58 (16%)
ANK repeat 633..661 CDD:293786 9/27 (33%)
ANK repeat 663..694 CDD:293786 13/40 (33%)
ANK repeat 696..724 CDD:293786 10/36 (28%)
ANK repeat 730..760 CDD:293786 13/87 (15%)
ANKYR 744..1062 CDD:440430 114/414 (28%)
ANK repeat 765..794 CDD:293786 9/29 (31%)
ANK repeat 796..827 CDD:293786 14/30 (47%)
ANK repeat 829..858 CDD:293786 7/28 (25%)
ANK repeat 862..894 CDD:293786 8/37 (22%)
ANK repeat 896..923 CDD:293786 10/26 (38%)
ANK repeat 927..957 CDD:293786 14/75 (19%)
ANK repeat 959..991 CDD:293786 10/32 (31%)
ANK repeat 993..1023 CDD:293786 15/29 (52%)
ANK 2321..2349 CDD:197603
ANK repeat 2323..2352 CDD:293786
ANKYR 2336..2623 CDD:440430
ANK repeat 2354..2386 CDD:293786
ANK repeat 2390..2419 CDD:293786
ANK repeat 2421..2452 CDD:293786
ANK repeat 2456..2486 CDD:293786
ANK repeat 2492..2521 CDD:293786
ANK repeat 2523..2589 CDD:293786
ANK repeat 2560..2587 CDD:293786
ANK repeat 2591..2622 CDD:293786
KH-I_MASK 3047..3116 CDD:411832
Blue background indicates that the domain is not in the aligned region.

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