DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompC and trp

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:NP_476768.1 Gene:trp / 43542 FlyBaseID:FBgn0003861 Length:1275 Species:Drosophila melanogaster


Alignment Length:835 Identity:181/835 - (21%)
Similarity:308/835 - (36%) Gaps:227/835 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1036 LLQSQDRNGRTGLHIAAMHGHIQMVEILL---------GQGAEINATDRN------GWTPLHCAA 1085
            ||:.....|...|| |....:::.||.||         ||.....|.||:      ..|||..||
  Fly    89 LLEHNIEVGDALLH-AISEEYVEAVEELLQWEETNHKEGQPYSWEAVDRSKSTFTVDITPLILAA 152

  Fly  1086 KAGHLEVVKLLCEAGASPKSETNYGCAAIWFAASEGHNEVLRYLMNKEHDTYGLMEDKRFVYNLM 1150
            ...:.|::|:|.:.||:.....:..|         |.:|.                    |.:.|
  Fly   153 HRNNYEILKILLDRGATLPMPHDVKC---------GCDEC--------------------VTSQM 188

  Fly  1151 VVSKNHNNKPIQEF---------VLVSPAPVDTAAKLSNIYIVLSTKEKERAKDLVAAGKQCEAM 1206
            ..|..|:...|..:         .|.|..||.||.:||.....|...|.|...:.....:..:..
  Fly   189 TDSLRHSQSRINAYRALSASSLIALSSRDPVLTAFQLSWELKRLQAMESEFRAEYTEMRQMVQDF 253

  Fly  1207 ATELLALAAGS-----------DSAGKILQATDKRNVEFLDVLIENEQKEVIAHTVVQRYLQELW 1260
            .|.||..|..|           :.:..|.....::.:|.|.:.|..:||..:||..||:.|..:|
  Fly   254 GTSLLDHARTSMELEVMLNFNHEPSHDIWCLGQRQTLERLKLAIRYKQKTFVAHPNVQQLLAAIW 318

  Fly  1261 HGSL-----TWASWKILLLLVAFIVCPPVWIGFTFPM------------GHKFNKVPIIKFMSYL 1308
            :..|     ..||.:::         ..|.:|.:||:            |.||.:.|.:||:::.
  Fly   319 YDGLPGFRRKQASQQLM---------DVVKLGCSFPIYSLKYILAPDSEGAKFMRKPFVKFITHS 374

  Fly  1309 TSHIYLMIHLSIVGITPIYPVLRLSLVPY-------W-----------YEVGLLIWLSGLL---- 1351
            .|:::.::.|....:..:.....|...|:       |           .|:.::.::..|:    
  Fly   375 CSYMFFLMLLGAASLRVVQITFELLAFPWMLTMLEDWRKHERGSLPGPIELAIITYIMALIFEEL 439

  Fly  1352 -------LFE----LTNPSDKSGLGSIKVLVLLLGMAGVGVHVSAFL-----FVSKEYW----PT 1396
                   |||    |.|..|..........:|....|.|.||...:.     :..:|:|    |.
  Fly   440 KSLYSDGLFEYIMDLWNIVDYISNMFYVTWILCRATAWVIVHRDLWFRGIDPYFPREHWHPFDPM 504

  Fly  1397 LVYCRNQCFALAFLLACVQILDFLSFHHLFGPWAIIIGDLLKDLARFLAVLAIFVFGFSMHIVAL 1461
            |:  ....||...:.:.::::...|.:...||..:.:|.::.|:.:|..:..:.:|.|.   ..|
  Fly   505 LL--SEGAFAAGMVFSYLKLVHIFSINPHLGPLQVSLGRMIIDIIKFFFIYTLVLFAFG---CGL 564

  Fly  1462 NQSFANFSPEDLRSFEKKNRNRGYFSDDDMPTPRPPPVENYVDS--------RFSEFRRKHKDDL 1518
            ||.        |..:.:..:|:.|...        |.|.::.|.        |||          
  Fly   565 NQL--------LWYYAELEKNKCYHLH--------PDVADFDDQEKACTIWRRFS---------- 603

  Fly  1519 RMHPINSFEL---LFFAVFGQTTTEQTQVDKIKNVATPTQPYWVEYLFKIVFGIYMLVSVVVLIN 1580
                 |.||.   ||:|.||........:..||:...    :|.    .::||.|.:::::||:|
  Fly   604 -----NLFETSQSLFWASFGLVDLVSFDLAGIKSFTR----FWA----LLMFGSYSVINIIVLLN 655

  Fly  1581 LLIAMMSDTYQRIQAQSDIEWKFGLSKL-IRNMHRTTTAPSPLNLVTTWFMWIVEKVKARMKKKK 1644
            :||||||::||.|..::|.||||..|:| :.......|.|.|.||...  |.::.|...|    |
  Fly   656 MLIAMMSNSYQIISERADTEWKFARSQLWMSYFEDGGTIPPPFNLCPN--MKMLRKTLGR----K 714

  Fly  1645 RPSLVQMMGIRQASPRTKAGAKWLSKI-----------KKDSVALSQVHLSPLGSQASFSQANQN 1698
            |||..:.. :|::..|.:.....:.|:           ::|...:::..:..:....|..:....
  Fly   715 RPSRTKSF-MRKSMERAQTLHDKVMKLLVRRYITAEQRRRDDYGITEDDIIEVRQDISSLRFELL 778

  Fly  1699 RIENVADWEA--IAKKYRALVGDEEG-----GSLKD-------------SDAESG 1733
            .|....:|:.  |.||.:.:....:|     ..|||             |::|||
  Fly   779 EIFTNNNWDVPDIEKKSQGVARTTKGKVMERRILKDFQIGFVENLKQEMSESESG 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560
ANK 720..847 CDD:238125
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
Ank_5 779..834 CDD:290568
ANK 787..915 CDD:238125
ANK repeat 792..824 CDD:293786
ANK repeat 861..893 CDD:293786
Ank_4 865..915 CDD:290365
Ank_4 929..995 CDD:290365
ANK repeat 932..972 CDD:293786
ANK 969..1096 CDD:238125 22/74 (30%)
ANK repeat 974..1007 CDD:293786
Ank_2 979..1074 CDD:289560 13/46 (28%)
ANK repeat 1009..1041 CDD:293786 2/4 (50%)
ANK 1039..1159 CDD:238125 30/134 (22%)
ANK repeat 1043..1074 CDD:293786 11/39 (28%)
Ank_2 1048..1135 CDD:289560 25/101 (25%)
ANK repeat 1076..1101 CDD:293786 8/30 (27%)
ANK repeat 1109..1134 CDD:293786 3/24 (13%)
Ion_trans <1393..1598 CDD:278921 51/219 (23%)
trpNP_476768.1 trp 16..776 CDD:273311 168/776 (22%)
ANK 64..>168 CDD:238125 23/79 (29%)
ANK repeat 69..98 CDD:293786 2/8 (25%)
ANK repeat 99..135 CDD:293786 10/36 (28%)
ANK repeat 137..168 CDD:293786 8/30 (27%)
TRP_2 178..236 CDD:285535 17/86 (20%)
BASP1 938..1158 CDD:283191
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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