DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompC and CG42534

DIOPT Version :10

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:NP_651560.2 Gene:CG42534 / 43298 FlyBaseID:FBgn0260487 Length:1555 Species:Drosophila melanogaster


Alignment Length:632 Identity:157/632 - (24%)
Similarity:225/632 - (35%) Gaps:199/632 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   577 DGATALHYTCQITKEEVKIPESDKQIVRML--LENGADVTLQTKTALETAFHYCAV---AGNND- 635
            :|.|:|.|.||         ..|  ||::|  :....::..|...:...|.||||.   .|:.| 
  Fly   122 EGCTSLMYACQ---------RGD--IVQVLAQMREKPELLRQRDRSHRNALHYCAAQDSEGSKDL 175

  Fly   636 VLMEMISHMNPTDIQKAMNRQSSVGWTPLLIACHRGHMELVNNLLANHARVDVFDTEGRSALHLA 700
            |....|:...|..::.|    ...|:|||.:|..:|::.:||.||||.|.|:..|.||.|.:|.|
  Fly   176 VAAASIAIAAPELLESA----DEDGFTPLHLAVIQGNLAMVNLLLANKADVNAVDNEGHSVVHWA 236

  Fly   701 AERGYLHVCDALLTNKAFINSKSRVGRTALHLAAMNGFTHLVKFLIKDHNAVIDILTLRKQTPLH 765
            .      ||                                                        
  Fly   237 T------VC-------------------------------------------------------- 239

  Fly   766 LAAASGQMEVCQLLLELGANIDATDDLGQKPIHVAAQ---------------NNYS----EVAKL 811
                 |::|..:.:|..||::...|..|..|:|.|||               :|.|    |:..:
  Fly   240 -----GEVESLRAVLAAGASVAKPDANGGTPLHYAAQMCGASKQDSKQQASSSNSSRLSLEILGI 299

  Fly   812 FLQQHPSLVNATSKDGNTCAHIAAMQGSVKVIEELMKFDRSGVISARNKLTDATPLQLAAEGGHA 876
            .|....|.|:...|||.                                    .||..||..|.|
  Fly   300 LLSHPQSSVDVQDKDGR------------------------------------QPLLWAASAGSA 328

  Fly   877 DVVKALVRAGASCTEENKAGFTAVHLAAQNGHGQVLDVL-----KSTNSLRINSKKLGLTPLHVA 936
            ..|.|||:|||.....:|.|.||:|.|...||.:.:|.|     ..|:.:..|    |.|.||.|
  Fly   329 KAVIALVKAGARVESSDKDGLTALHCAGSRGHTECIDTLIGLCGAPTDLIDSN----GCTALHYA 389

  Fly   937 AYYGQADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLHLAAFSGNENVVRLLLNSAGVQ 1001
            ...|.||....||.      ....|..|.       ..|.||.|.....|....::||.      
  Fly   390 VTLGHADATARLLD------LEADPNRQD-------RKGRTPAHCGCSKGQFETLKLLK------ 435

  Fly  1002 VDAATIENGYN----------PLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTGLHIAAMHGH 1056
                  |.|.|          |||.|...|...::..||::..:.:.:...:||:.|||||.:.:
  Fly   436 ------ERGANLWLRNAKGDLPLHEAAASGRRELLEWLLAQRPKQVNTTSNDGRSLLHIAAANDY 494

  Fly  1057 IQMVEILLGQGAEINATDRNG----WTPLHCAAKAGHLEVVKLLCEAGASPKSETNYGCAAIW-- 1115
            ..|.::||..||::||..||.    .|||..|.:.||....|.|...|..|.::.........  
  Fly   495 TDMCKLLLDYGADVNAVYRNSRGLVLTPLDGALQRGHRSTAKFLQANGGQPANKVRLSSRRTGNP 559

  Fly  1116 FAASEGHNEV--LRYLMNKE-HDTYGLMEDKRFVYNLMVVSKNHNNK 1159
            |..:...:.|  |:|:..:| ||   |...|::|..|.....::.|:
  Fly   560 FHETNATDMVRPLKYVEKEELHD---LRSSKKYVVYLKRSDSDNGNE 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANKYR <125..371 CDD:440430
ANK repeat 129..157 CDD:293786
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
ANK repeat 267..298 CDD:293786
ANKYR 281..572 CDD:440430
ANK repeat 300..331 CDD:293786
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK repeat 501..532 CDD:293786
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786 10/40 (25%)
Ank_2 599..690 CDD:463710 30/96 (31%)
ANKYR 651..933 CDD:440430 71/305 (23%)
ANK repeat 660..690 CDD:293786 14/29 (48%)
ANK repeat 692..723 CDD:293786 7/30 (23%)
ANK repeat 725..757 CDD:293786 0/31 (0%)
ANK repeat 759..790 CDD:293786 5/30 (17%)
ANK repeat 792..824 CDD:293786 12/50 (24%)
ANKYR 843..1144 CDD:440430 88/324 (27%)
ANK repeat 861..893 CDD:293786 13/31 (42%)
ANK repeat 932..972 CDD:293786 10/39 (26%)
ANK repeat 974..1007 CDD:293786 7/32 (22%)
ANK repeat 1009..1041 CDD:293786 9/41 (22%)
TRPV 1035..1684 CDD:454755 38/134 (28%)
ANK repeat 1043..1074 CDD:293786 14/30 (47%)
ANK repeat 1076..1101 CDD:293786 9/28 (32%)
ANK repeat 1109..1134 CDD:293786 5/29 (17%)
CG42534NP_651560.2 Ank_2 127..226 CDD:463710 34/113 (30%)
ANK repeat 195..226 CDD:293786 14/30 (47%)
ANKYR 209..514 CDD:440430 105/436 (24%)
ANK repeat 228..259 CDD:293786 12/97 (12%)
ANK repeat 314..345 CDD:293786 15/66 (23%)
ANK repeat 347..379 CDD:293786 10/31 (32%)
ANK repeat 381..412 CDD:293786 12/40 (30%)
ANK repeat 414..479 CDD:293786 17/76 (22%)
ANK repeat 419..445 CDD:293786 7/37 (19%)
ANK repeat 481..511 CDD:293786 13/29 (45%)
Ank_2 486..572 CDD:463710 26/85 (31%)
ANK repeat 516..542 CDD:293786 8/25 (32%)
Blue background indicates that the domain is not in the aligned region.

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