DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompC and Ripk4

DIOPT Version :10

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:NP_001100573.2 Gene:Ripk4 / 304053 RGDID:1311691 Length:786 Species:Rattus norvegicus


Alignment Length:933 Identity:215/933 - (23%)
Similarity:343/933 - (36%) Gaps:257/933 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 LKADGRGK--IPLLLAVESGNQSMCRELLAAQTAEQLKATTANGDT--------ALHLAARRRDV 281
            ::.:|||:  :.||...::|..:...::.:....:..|....:..|        :||:..|.|  
  Rat     1 MEGEGRGRWALGLLRTFDAGEFAGWEKVGSGGFGQVYKVRHVHWKTWLAIKCSPSLHVDDRER-- 63

  Fly   282 DMVRILVDYGTNVDTQNGEGQTPLHIAAAEGDEALLKYF---YGVRASASIADNQDRTPMHLAAE 343
                                 |.|...|.:.:.|..:|.   ||:          .:.|:.|..|
  Rat    64 ---------------------TELLEEAKKMEMAKFRYILPVYGI----------CQEPVGLVME 97

  Fly   344 NGHAHVIE-ILADK-----FKASIFERTKDGSTLMHIAS---LNGHAECATMLFKKGVYLHMPNK 399
            ......:| :||.:     .:..|...|..|...:|..|   |:...:.|.:|.  ..:.|:...
  Rat    98 YMETGSLEKLLASEPLPWDLRFRIVHETAVGMNFLHCMSPPLLHLDLKPANILL--DAHYHVKIS 160

  Fly   400 D-------GARSIHTAAAYGHTGIINTL----LQKGEKVDVTTNDNYT-ALHI--AVESAKPAVV 450
            |       |....|..:..|..|.|..|    :::..::..|.:|.|: |:.|  .:...||   
  Rat   161 DFGLAKCNGMSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLTQKKP--- 222

  Fly   451 ETLLGFGADVHVRGGKLRETPLHIAARVKDGDRCALMLLKSGASPNLTTDDCLTPVHVAARHGNL 515
                 |..:.::         |||..:|..|.|           |.|       |.....|....
  Rat   223 -----FSDEKNI---------LHIMMKVVKGHR-----------PEL-------PPICRPRPRAC 255

  Fly   516 ATLMQLL------EDEGDPLYKSNTGETPLHMACRACHPD-IVRHLIETVKEKHGPD---KATTY 570
            |:|:.|:      :.:..|.::..|.||  ...|.  .|| .|:.|.....||..|:   :|...
  Rat   256 ASLIGLMQRCWHADPQVRPTFQEITSET--EDLCE--KPDEEVKDLAHEPGEKSSPEPRSEARPE 316

  Fly   571 INSVNEDGATALHYTCQITK-----------------------EEVKIPESDKQIVRMLLENGAD 612
            .:.:....|......|.:::                       .|.|:|.|... .|:...:..|
  Rat   317 SSRLKRASAPPFDNDCSLSELLSQLDSGISQTLEGPEELSRSSSECKLPSSSSG-KRLSGVSSVD 380

  Fly   613 VTLQTKTALETAFHYCA-------------------VAGNNDVLMEMISHMNPTDIQKAMNRQSS 658
            ....::.:|..:|...|                   |:|:.:.||::   :.|.|:...::..:|
  Rat   381 SAFSSRGSLSLSFEREASTGDLGPTDIQKKKLVDAIVSGDTNKLMKI---LQPQDVDLVLDSSAS 442

  Fly   659 VGWTPLLIACHRGHMELVNNLLANHARVDVFDTEGRSALHLAAERGYLHVCDALLTNKAFINSKS 723
            :    |.:|...|..|.|..||.|:|..::.:.:|.:.||:|.||....:.:.||..|..:|:|.
  Rat   443 L----LHLAVEAGQEECVKWLLLNNANPNLTNKKGSTPLHMAVERRGRGIVELLLARKTSVNAKD 503

  Fly   724 RVGRTALHLAAMNGFTHLVKFLIKDHNAVIDILTLRKQTPLHLAAASGQMEVCQLLLELGANIDA 788
            ....||||.||.||.....:.|: :.||.::.:....:||:|:|...||..:.:.||..|.::..
  Rat   504 EDQWTALHFAAQNGDEASTRLLL-EKNASVNEVDFEGRTPMHVACQHGQENIVRTLLRRGVDVGL 567

  Fly   789 TDDLGQKPIHVAAQNNYSEVAKLFLQQHPSLVNATSKDGNTCAHIAAMQGSVKVIEELMKFDRSG 853
            .......|:|.||...:..:.||..:|....|||.:.||.|..|:||.:|..:|...|:  |.|.
  Rat   568 QGKDAWLPLHYAAWQGHLPIVKLLAKQPGVSVNAQTLDGRTPLHLAAQRGHYRVARILI--DLSS 630

  Fly   854 VISARNKLTDATPLQLAAEGGHADVVKALVRAGASCTEENKAGFTAVHLAAQNGHGQVLDVLKST 918
            .|:..: |...|||.:|||.||....:.|:..||........|:||:||||:|||          
  Rat   631 DINICS-LQAQTPLHVAAETGHTSTARLLLHRGAGKEALTSEGYTALHLAARNGH---------- 684

  Fly   919 NSLRINSKKLGLTPLHVAAYYGQADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLHLAA 983
                                   ..||: ||....|.|.:..|..|            |.|||||
  Rat   685 -----------------------LATVK-LLIEEKADVLARGPLNQ------------TALHLAA 713

  Fly   984 FSGNENVVRLLLNSAGVQVDAATIENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTGL 1048
            ..|:..||..|:                                     ||:|:...|..|.:.|
  Rat   714 ARGHSEVVEELV-------------------------------------SADLIDLSDEQGLSAL 741

  Fly  1049 HIAAMHGHIQMVEILLGQGAEIN 1071
            |:||...|.|.|||||..||.||
  Rat   742 HLAAQGRHSQTVEILLKHGAHIN 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANKYR <125..371 CDD:440430 28/162 (17%)
ANK repeat 129..157 CDD:293786
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786 6/34 (18%)
ANK repeat 267..298 CDD:293786 5/38 (13%)
ANKYR 281..572 CDD:440430 63/326 (19%)
ANK repeat 300..331 CDD:293786 7/33 (21%)
ANK repeat 367..398 CDD:293786 7/33 (21%)
ANK repeat 400..431 CDD:293786 7/41 (17%)
ANK repeat 433..463 CDD:293786 7/32 (22%)
ANK repeat 469..499 CDD:293786 8/29 (28%)
ANK repeat 501..532 CDD:293786 6/36 (17%)
ANK repeat 534..575 CDD:293786 12/44 (27%)
ANK repeat 577..616 CDD:293786 8/61 (13%)
Ank_2 599..690 CDD:463710 21/109 (19%)
ANKYR 651..933 CDD:440430 85/281 (30%)
ANK repeat 660..690 CDD:293786 9/29 (31%)
ANK repeat 692..723 CDD:293786 10/30 (33%)
ANK repeat 725..757 CDD:293786 11/31 (35%)
ANK repeat 759..790 CDD:293786 9/30 (30%)
ANK repeat 792..824 CDD:293786 10/31 (32%)
ANKYR 843..1144 CDD:440430 64/229 (28%)
ANK repeat 861..893 CDD:293786 12/31 (39%)
ANK repeat 932..972 CDD:293786 8/39 (21%)
ANK repeat 974..1007 CDD:293786 10/32 (31%)
ANK repeat 1009..1041 CDD:293786 3/31 (10%)
TRPV 1035..1684 CDD:454755 18/37 (49%)
ANK repeat 1043..1074 CDD:293786 16/29 (55%)
ANK repeat 1076..1101 CDD:293786
ANK repeat 1109..1134 CDD:293786
Ripk4NP_001100573.2 STKc_RIP4_like 25..290 CDD:270927 61/338 (18%)
ANKYR 432..709 CDD:440430 95/330 (29%)
ANK repeat 442..470 CDD:293786 10/31 (32%)
ANK repeat 473..503 CDD:293786 10/29 (34%)
ANK repeat 505..536 CDD:293786 11/31 (35%)
ANK repeat 538..569 CDD:293786 9/30 (30%)
ANK repeat 571..602 CDD:293786 9/30 (30%)
ANK repeat 605..636 CDD:293786 12/32 (38%)
ANK repeat 638..669 CDD:293786 11/30 (37%)
ANK repeat 671..701 CDD:293786 16/63 (25%)
Ank_2 676..766 CDD:463710 45/172 (26%)
ANK repeat 736..766 CDD:293786 16/29 (55%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.