DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompC and Trpc7

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:XP_017455952.1 Gene:Trpc7 / 282822 RGDID:628820 Length:904 Species:Rattus norvegicus


Alignment Length:877 Identity:183/877 - (20%)
Similarity:324/877 - (36%) Gaps:254/877 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   966 LFGDLGTESGMTP-----LHLAAFSGNENVVRLLLNSAGVQVDAATIENGYNPLHLACFGGHMSV 1025
            :|.:.||  .:||     |..|.: ||..|||.:|..:...........|.|.|.||....|:.|
  Rat   129 MFNEKGT--SLTPEEERFLDSAEY-GNIPVVRKMLEESKTLNFNCVDYMGQNALQLAVGNEHLEV 190

  Fly  1026 VGLLLSRSAELLQSQDRNGRTG--LHIAAMHGHIQMVEILL-----GQGAEIN------------ 1071
                    .|||..::...|.|  |.:|...|::::||.:|     .||..:.            
  Rat   191 --------TELLLKKENLARVGDALLLAISKGYVRIVEAILSHPAFAQGQRLTLSPLEQELRDDD 247

  Fly  1072 --ATDRNGW------TPLHCAAKAGHLEVVKLLCEAGASPKSETNYGCAAIWFAASEGHNEVLRY 1128
              |.|.:|.      ||:..||.....|:|.:|...||..:...:|.|..         ||... 
  Rat   248 FYAYDEDGTRFSHDITPIILAAHCQEYEIVHILLLKGARIERPHDYFCKC---------NECTE- 302

  Fly  1129 LMNKEHDTYGLMEDKRFVYNLMVVSKNHNNKPIQEFVLVSPAPVDTAAKLSNIYIVLSTKEKERA 1193
              .:..|::.....:...|..:..:        ....|.|..||.||.:|||....|:..|.|..
  Rat   303 --KQRKDSFSHSRSRMNAYKGLASA--------AYLSLSSEDPVLTALELSNELARLANIETEFK 357

  Fly  1194 KDLVAAGKQCEAMATELLALAAGSDSAGKILQATDKRNVEFLDVLIENEQKEVIAHTVVQRYLQE 1258
            .|......||:...                        |..||:..:.|:.|.|.:..|.  || 
  Rat   358 NDYRKLSMQCKDFV------------------------VGVLDLCRDTEEVEAILNGDVN--LQ- 395

  Fly  1259 LWHGSLTWA-----SWKILLLLVAFIVCPPVWIGFTFPMGHKFNKVPIIKFMSYLTSHIYLMIHL 1318
                  .|:     |...:.|.:.:.|..   :|.|.       :.|.:||:::..| ..:.:.|
  Rat   396 ------VWSDHHRPSLSRIKLAIKYEVKK---LGRTL-------RSPFMKFVAHAVS-FTIFLGL 443

  Fly  1319 SIV-------GITPI-------YP--VLRLSLVPY-WYEVGLLIWLSGLL--------------- 1351
            .:|       |:..:       ||  :.|:....: |.|:.::.|:.|::               
  Rat   444 LVVNASDRFEGVKTLPNETFTDYPKQIFRVKTTQFSWTEMLIMKWVLGMIWSECKEIWEEGPREY 508

  Fly  1352 LFELTNPSDKSGLGSIKVLV--------------------------LLLGMAGVGVHVSAFLFVS 1390
            :..|.|..|   .|.:.|.|                          :.|....:...|:.|.:..
  Rat   509 VLHLWNLLD---FGMLSVFVASFTARFMAFLKASEAQLYVDQYVQDVTLHNVSLPPEVAYFTYAR 570

  Fly  1391 KEYWPTLVYCRNQ-CFALAFLLACVQILDFLSFHHLFGPWAIIIGDLLKDLARFLAVLAIFVFGF 1454
            .::||:.....:: .:|:|.:|:..:|...|..:..|||..|.:|..:||:.:|   :.||:..|
  Rat   571 DKWWPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKF---MVIFIMVF 632

  Fly  1455 SMHIVALNQSFANFSPEDLRSFEKKNRNRGYFSDDDMPTPRPPPVENYVDSRFSEFRRKHKDDLR 1519
            ...::.:...::.:            |...|       .|....||                   
  Rat   633 VAFMIGMFNLYSYY------------RGAKY-------NPAFTTVE------------------- 659

  Fly  1520 MHPINSFELLFFAVFGQTTTEQTQVDKIKNVATPTQPYWVEYLFKIVFGIYMLVSVVVLINLLIA 1584
                .||:.||:::||        :.::.:|.......::|.:..:::|:|.:..||||:|:|||
  Rat   660 ----ESFKTLFWSIFG--------LSEVISVVLKYDHKFIENIGYVLYGVYNVTMVVVLLNMLIA 712

  Fly  1585 MMSDTYQRIQAQSDIEWKFGLSKL-IRNMHRTTTAPSPLNLVTT--WFMWIVEKVKARM-----K 1641
            |::::||.|:..:|:||||..:|| :.......|.|:|.|||.:  .|.:::.::|..:     .
  Rat   713 MINNSYQEIEEDADVEWKFARAKLWLSYFDEGRTLPAPFNLVPSPKSFYYLIMRIKMCLIKLCKS 777

  Fly  1642 KKKRPSLVQMMGIRQASPRTKAGAKWLSKIKKDSVALSQVHLSPLGSQASFSQANQNRIENVADW 1706
            |.||......||:..            ||.:|........:...|.:.::||:  ..|.:.:  .
  Rat   778 KAKRCENDLEMGMLN------------SKFRKTRYQAGMRNSENLTANSTFSK--PTRYQKI--M 826

  Fly  1707 EAIAKKY--RALVGDEEGGSLKDSDAESGSQE 1736
            :.:.|:|  :|.| |.|...:.:.:.:...|:
  Rat   827 KRLIKRYVLKAQV-DRENDEVNEGELKEIKQD 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560
ANK 720..847 CDD:238125
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
Ank_5 779..834 CDD:290568
ANK 787..915 CDD:238125
ANK repeat 792..824 CDD:293786
ANK repeat 861..893 CDD:293786
Ank_4 865..915 CDD:290365
Ank_4 929..995 CDD:290365 12/33 (36%)
ANK repeat 932..972 CDD:293786 1/5 (20%)
ANK 969..1096 CDD:238125 41/158 (26%)
ANK repeat 974..1007 CDD:293786 10/37 (27%)
Ank_2 979..1074 CDD:289560 29/115 (25%)
ANK repeat 1009..1041 CDD:293786 10/31 (32%)
ANK 1039..1159 CDD:238125 28/146 (19%)
ANK repeat 1043..1074 CDD:293786 11/51 (22%)
Ank_2 1048..1135 CDD:289560 24/111 (22%)
ANK repeat 1076..1101 CDD:293786 8/30 (27%)
ANK repeat 1109..1134 CDD:293786 4/24 (17%)
Ion_trans <1393..1598 CDD:278921 45/205 (22%)
Trpc7XP_017455952.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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