DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompC and CG30271

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:NP_001188986.2 Gene:CG30271 / 246518 FlyBaseID:FBgn0050271 Length:501 Species:Drosophila melanogaster


Alignment Length:129 Identity:41/129 - (31%)
Similarity:59/129 - (45%) Gaps:19/129 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   985 SGNENVVRLLLNSAGVQVDAAT--IENGYNPLHLACFGGHMSVVGLLLSR--SAELLQSQDRNGR 1045
            |.|..|.|.|         ||.  :.|....||.|....::..|...|..  .:.|:..:|.||.
  Fly    78 SNNGRVKRFL---------AAVPHVMNAIKDLHQAVIDNNLETVQAQLEPPVPSALVTCKDGNGL 133

  Fly  1046 TGLHIAAMHGHIQMVEILLG---QGAEINATDRNGWTPLHCAAKA-GHLEVVKLLCEAGASPKS 1105
            ..:|.||..||.:::|.|:|   :||  :.||..|.||||.||.| .::....||.:||...::
  Fly   134 NIIHKAAGLGHTKLLEYLVGIWPEGA--HETDITGKTPLHWAASAKNNMRCYTLLTQAGCDEEA 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560
ANK 720..847 CDD:238125
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
Ank_5 779..834 CDD:290568
ANK 787..915 CDD:238125
ANK repeat 792..824 CDD:293786
ANK repeat 861..893 CDD:293786
Ank_4 865..915 CDD:290365
Ank_4 929..995 CDD:290365 4/9 (44%)
ANK repeat 932..972 CDD:293786
ANK 969..1096 CDD:238125 37/118 (31%)
ANK repeat 974..1007 CDD:293786 7/23 (30%)
Ank_2 979..1074 CDD:289560 27/95 (28%)
ANK repeat 1009..1041 CDD:293786 7/33 (21%)
ANK 1039..1159 CDD:238125 27/71 (38%)
ANK repeat 1043..1074 CDD:293786 12/33 (36%)
Ank_2 1048..1135 CDD:289560 24/62 (39%)
ANK repeat 1076..1101 CDD:293786 11/25 (44%)
ANK repeat 1109..1134 CDD:293786
Ion_trans <1393..1598 CDD:278921
CG30271NP_001188986.2 ANK 100..206 CDD:238125 33/98 (34%)
Ank_2 100..197 CDD:289560 33/98 (34%)
ANK repeat 100..129 CDD:293786 6/28 (21%)
ANK repeat 131..163 CDD:293786 12/33 (36%)
ANK repeat 165..197 CDD:293786 12/31 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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