DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompC and Trpc3

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:NP_062383.2 Gene:Trpc3 / 22065 MGIID:109526 Length:910 Species:Mus musculus


Alignment Length:897 Identity:201/897 - (22%)
Similarity:340/897 - (37%) Gaps:274/897 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   982 AAFSGNENVVRLLL-NSAGVQVDAATIENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGR 1045
            ||..||..|||.:| .|..:.|:.... .|.|.|.||....|:.|        .|||..::...|
Mouse   108 AAEYGNIPVVRKMLEESRTLNVNCVDY-MGQNALQLAVGNEHLEV--------TELLLKKENLAR 163

  Fly  1046 TG--LHIAAMHGHIQMVEILLG-------------------QGAEINATDRNGW------TPLHC 1083
            .|  |.:|...|::::||.:||                   :..:..|.|.:|.      ||:..
Mouse   164 IGDALLLAISKGYVRIVEAILGHPGFAASRRLTLSPCEQELRDDDFYAYDEDGTRFSPDITPIIL 228

  Fly  1084 AAKAGHLEVVKLLCEAGASPKSETNYGCAAIWFAASEGHNEVLRYLMNKEHDTYGLMEDKRFVYN 1148
            ||.....|||.||...||..:...:|.|.....|..:            ..|.:           
Mouse   229 AAHCHKYEVVHLLLLKGARIERPHDYFCRCSDCAEKQ------------RLDAF----------- 270

  Fly  1149 LMVVSKNHNNKPIQEFV-LVSPA--------PVDTAAKLSNIYIVLSTKEKERAKDLVAAGKQCE 1204
                  :|:...|..:. |.|||        ||.||.:|||....|:..|||...|......||:
Mouse   271 ------SHSRSRINAYKGLASPAYLSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCK 329

  Fly  1205 AMATELLALAAGSDSAGKILQATDKRNVEFLD------------VLIENEQKEVIAHTVVQRYLQ 1257
            .....:|.|...|:....||.. |..:.|.|:            :.|:.|.|:.:||...|:.|.
Mouse   330 DFVVGVLDLCRDSEEVEAILNG-DLESAEPLERHGHKASLSRVKLAIKYEVKKFVAHPNCQQQLL 393

  Fly  1258 ELWHGSLT-----WASWKILLLLVAFIVCPPVWIGFTFPMGHKFNKV---PIIKFMSYLTSHIYL 1314
            .:|:.:|:     ..:.|.|::||..:..|.:.||:......:..|:   |.:||:::..|.|  
Mouse   394 TIWYENLSGLREQTIAIKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFI-- 456

  Fly  1315 MIHLSIV---------GITPI-------YP--VLRLSLVPY-WYEVGLLIWLSGLL--------- 1351
             |.|.::         |||.:       ||  :.|:....: |.|:.:::|:.|::         
Mouse   457 -IFLGLLVFNASDRFEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWL 520

  Fly  1352 ------LFELTNPSDKSGLGSIKVLVLLLGMAGVGVHVSAFLFVSK------------------- 1391
                  :.:|.|..|   .|.:.:.:     |.......|||..:|                   
Mouse   521 EGPREYIVQLWNVLD---FGMLSIFI-----AAFTARFLAFLQATKAQQYVDSHVQESDLSEVTL 577

  Fly  1392 ----EYWPTLVYCRNQ------------CFALAFLLACVQILDFLSFHHLFGPWAIIIGDLLKDL 1440
                :|:   .|.|::            .:|:|.:|:..:|...|..:..|||..|.:|..:||:
Mouse   578 PPEVQYF---TYARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDI 639

  Fly  1441 ARFLAVLAIFVF-GFSMHIVALNQSFANFSPEDLRSFEKKNRNRGYFSDDDMPTPRPPPVENYVD 1504
            .:|: ||.|.|| .|.:.:..|...:..         .|.|             |....||    
Mouse   640 FKFM-VLFIMVFLAFMIGMFILYSYYLG---------AKVN-------------PAFTTVE---- 677

  Fly  1505 SRFSEFRRKHKDDLRMHPINSFELLFFAVFGQTTTEQTQVDKIKNVATPTQPYWVEYLFKIVFGI 1569
                               .||:.||:::||        :.::.:|.......::|.:..:::||
Mouse   678 -------------------ESFKTLFWSIFG--------LSEVTSVVLKYDHKFIENIGYVLYGI 715

  Fly  1570 YMLVSVVVLINLLIAMMSDTYQRIQAQSDIEWKFGLSKL-IRNMHRTTTAPSPLNLVTT--WFMW 1631
            |.:..||||:|:||||::.:||.|:..||:||||..||| :.......|.|.|.:||.:  .|::
Mouse   716 YNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLVPSPKSFVY 780

  Fly  1632 IVEKVKARMKKKKRPSLVQMMGIRQASPRTKAGAKWLSKIKKD-----SVALSQVHLSPLGSQAS 1691
            .:.::....|.::|                        :::||     ..:.|:::|....:...
Mouse   781 FIMRITNFSKCRRR------------------------RLQKDLELGMGNSKSRLNLFTQSNSRV 821

  Fly  1692 FSQANQNRIENVAD-----WEAIAKKY--RALVGDEEGGSLKDSDAESGSQE 1736
            |...:.|.|.|...     .:.:.|:|  :|.| |:|...:.:.:.:...|:
Mouse   822 FESHSFNSILNQPTRYQQIMKRLIKRYVLKAQV-DKENDEVNEGELKEIKQD 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560
ANK 720..847 CDD:238125
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
Ank_5 779..834 CDD:290568
ANK 787..915 CDD:238125
ANK repeat 792..824 CDD:293786
ANK repeat 861..893 CDD:293786
Ank_4 865..915 CDD:290365
Ank_4 929..995 CDD:290365 7/12 (58%)
ANK repeat 932..972 CDD:293786
ANK 969..1096 CDD:238125 39/141 (28%)
ANK repeat 974..1007 CDD:293786 10/25 (40%)
Ank_2 979..1074 CDD:289560 30/113 (27%)
ANK repeat 1009..1041 CDD:293786 10/31 (32%)
ANK 1039..1159 CDD:238125 28/146 (19%)
ANK repeat 1043..1074 CDD:293786 10/51 (20%)
Ank_2 1048..1135 CDD:289560 24/111 (22%)
ANK repeat 1076..1101 CDD:293786 10/30 (33%)
ANK repeat 1109..1134 CDD:293786 3/24 (13%)
Ion_trans <1393..1598 CDD:278921 51/217 (24%)
Trpc3NP_062383.2 trp 85..879 CDD:273311 201/897 (22%)
ANK 108..242 CDD:238125 40/142 (28%)
ANK repeat 135..166 CDD:293786 11/38 (29%)
ANK repeat 215..250 CDD:293786 12/34 (35%)
TRP_2 256..315 CDD:285535 17/87 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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