DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompC and Trpc1

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:XP_006511116.1 Gene:Trpc1 / 22063 MGIID:109528 Length:802 Species:Mus musculus


Alignment Length:869 Identity:189/869 - (21%)
Similarity:343/869 - (39%) Gaps:169/869 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   929 GLTP---LHVAAYYGQADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLH-----LAAFS 985
            ||.|   ..:||.|...|......:|:|::..|.:|.......|:........|:     ||...
Mouse     9 GLPPSWAAMMAALYPSTDLSGVSSSSLPSSPSSSSPNEVMALKDVREVKEENTLNEKLFLLACDK 73

  Fly   986 GNENVVRLLL--NSAG-VQVDAATIENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTG 1047
            |:..:|:.:|  ||:| :.::...: .|.|.:.:......:.::.|||....   ||.|     .
Mouse    74 GDYYMVKKILEENSSGDLNINCVDV-LGRNAVTITIENESLDILQLLLDYGC---QSAD-----A 129

  Fly  1048 LHIAAMHGHIQMVEILLGQGAEINATDRNGWTPLHCAAKAGHLEVVKLLCEAGASPKSETNYGCA 1112
            |.:|.....:..|:|||.                |...::....:|||: |...:|:..|....|
Mouse   130 LLVAIDSEVVGAVDILLN----------------HRPKRSSRPTIVKLM-ERIQNPEYSTTMDVA 177

  Fly  1113 AIWFAASEGHNEVLRYLMNKEHDTYGLMEDKRFVYNLMVVS-KNHNNKPIQEFVLVSPA------ 1170
            .:..||...:.|:|..|:.::   ..|.:.........:.| ||..:.......|.|||      
Mouse   178 PVILAAHRNNYEILTMLLKQD---VSLPKPHAVGCECTLCSAKNKKDSLRHSRCLASPALIMLTE 239

  Fly  1171 --PVDTAAKLSNIYIVLSTKEKERAKDLVAAGKQCEAMATELLALAAGSDSAGKILQAT------ 1227
              |:..|.:||.....||..|.|...|.....:||:..|.:|||.|..|.....||..|      
Mouse   240 EDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPL 304

  Fly  1228 DKR-------NVEFLDVLIENEQKEVIAHTVVQRYLQELWHGSLTW-----ASWKILLLLVAFIV 1280
            |||       |:..|.:.|:..|||.::.:..|::|..:|.|.::.     ...||:.:|...|.
Mouse   305 DKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIF 369

  Fly  1281 CPPVWIGFTFPMGHKFNKV---PIIKFMSYLTSHIYLMIHLSIVGITPIY---------PVL-RL 1332
            .|.:.:.:......:|.::   |.:||:.:..|:...::.|::..:  :|         |.| |:
Mouse   370 WPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSL--VYNEDKKNTMGPALERI 432

  Fly  1333 SLVPYWYEVGLL------IWLSGLLLFELTNPSDKSGLGSIKVLVLLLGMAGVGVHVSAFLFVSK 1391
            ..:...:.:|::      :|..||..|...:.:..|.:  :..|.|......|..|.....|..:
Mouse   433 DYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFV--MNSLYLATFALKVVAHNKFHDFADR 495

  Fly  1392 EYW----PTLVYCRNQCFALAFLLACVQILDFLSFHHLFGPWAIIIGDLLKDLARFLAVLAIFVF 1452
            :.|    ||||  ....||.|.:|:.:::....:...:.||..|.:|.:|:|..:||.:..:.:|
Mouse   496 KDWDAFHPTLV--AEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLF 558

  Fly  1453 GFSMHIVAL-NQSFANFSPED-LRSFEKKNRNRGYFSDDDMPTPRPPPVENYVDSRFSEFRRKHK 1515
            .|::.:..| ::.:.:...:| :..|.::..|..:.|              ::.:.|:.|     
Mouse   559 SFTIGLTQLYDKGYTSKEQKDCVGIFCEQQSNDTFHS--------------FIGTCFALF----- 604

  Fly  1516 DDLRMHPINSFELLFFAVFGQTTTEQTQVDKIKNVATPTQPYWVEYLFKIVFGIYMLVSVVVLIN 1580
                   ...|.|...|:|   .|..:..:::::           ::..::.|.|.:|.|:||..
Mouse   605 -------WYIFSLAHVAIF---VTRFSYGEELQS-----------FVGAVIVGTYNVVVVIVLTK 648

  Fly  1581 LLIAMMSDTYQRIQAQSDIEWKFGLSKL-IRNMHRTTTAPSPLNLV----TTWFM------WIVE 1634
            ||:||:..::|.|....|.||||..:|| :.......|.|.|.|::    |..:|      ||..
Mouse   649 LLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICS 713

  Fly  1635 KVKARMKKKKRPSLVQMMGIRQASPRTKAGAKWLSKIKKD----SVALSQVHLSPLGSQASFSQA 1695
            .. ::.|.|::.||.:...::|               |:|    .|....||......:......
Mouse   714 HT-SKGKVKRQNSLKEWRNLKQ---------------KRDENYQKVMCCLVHRYLTSMRQKMQST 762

  Fly  1696 NQNRIENVADWEAIAKKYRALVGD 1719
            :|..:||:.:......|:|..:.|
Mouse   763 DQATVENLNELRQDLSKFRNEIRD 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560
ANK 720..847 CDD:238125
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
Ank_5 779..834 CDD:290568
ANK 787..915 CDD:238125
ANK repeat 792..824 CDD:293786
ANK repeat 861..893 CDD:293786
Ank_4 865..915 CDD:290365
Ank_4 929..995 CDD:290365 17/73 (23%)
ANK repeat 932..972 CDD:293786 10/42 (24%)
ANK 969..1096 CDD:238125 27/134 (20%)
ANK repeat 974..1007 CDD:293786 9/40 (23%)
Ank_2 979..1074 CDD:289560 23/102 (23%)
ANK repeat 1009..1041 CDD:293786 7/31 (23%)
ANK 1039..1159 CDD:238125 25/120 (21%)
ANK repeat 1043..1074 CDD:293786 6/30 (20%)
Ank_2 1048..1135 CDD:289560 19/86 (22%)
ANK repeat 1076..1101 CDD:293786 5/24 (21%)
ANK repeat 1109..1134 CDD:293786 6/24 (25%)
Ion_trans <1393..1598 CDD:278921 43/210 (20%)
Trpc1XP_006511116.1 trp 64..783 CDD:273311 175/809 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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