DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompC and lido-18

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:NP_001367413.1 Gene:lido-18 / 176079 WormBaseID:WBGene00015988 Length:1199 Species:Caenorhabditis elegans


Alignment Length:1414 Identity:266/1414 - (18%)
Similarity:475/1414 - (33%) Gaps:425/1414 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NGDKKDMDL-FPAPKPPSAGASIRDTANKVLGLAMKSEWTPIEAE-LKKLEKYVANVGEDGNHIP 117
            |.|:.::|| |.|.|...|.|.:. ..||:..:...:....::|| ::||.| |.:|..:....|
 Worm    20 NHDESNLDLYFVARKKEPAPALVL-AYNKLAIITRVTNAIVLQAEGIRKLVK-VRDVVAELIRSP 82

  Fly   118 LAGVHDMNTGMTPLMYATKDNKTAIMDRMIELGADVGARNNDNYNVLHIAAMYSREDVVKLLLTK 182
            .|..:|       ||.....|...:::.:||...::    :.|.:...:..:.|:.::|:|::  
 Worm    83 NASFYD-------LMDVDPTNIFPVLNEIIEASKEM----SQNVDSKEMQELNSKTEMVELMI-- 134

  Fly   183 RGVDPFSTGGSRSQTAVHLVSSRQTGTATNILRALLAAAGKDIRLKADGRGKIPLLLAVESGNQS 247
            ..:....|.....:.........:.|:...|.                    ||.        .:
 Worm   135 HSIKHVKTRKINEKVITDFFDRFKNGSLDEIF--------------------IPC--------DT 171

  Fly   248 MCRELLAAQTAEQLKATTANG----DTALHLAARRRDV-DMVRILVDYGTNVDTQNGEGQTPLHI 307
            ...:|:...|....||...|.    |....|.:...:: :.::.|..|..:|.:...:.:  :.:
 Worm   172 TLLDLVINFTTIANKADYPNSFKPTDVITQLNSSSENITECLKHLELYNQSVSSLTTDFE--MFL 234

  Fly   308 AAAEGDEALLKYFYGVRASA-SIADNQDRTPMHLAAENGHAHVIEILADKFKA--SIFERTKDGS 369
            ...||.: |.:.|..:|..| |.....|              :||.:..|.|.  ||....:.|.
 Worm   235 RLGEGSD-LFEKFRSIREEAVSFLSTMD--------------LIEKVFLKTKKFWSIKRTNEVGR 284

  Fly   370 TLMHIAS-----LNGHAECATMLFKKGVYLHMPN-------KDGARS--IHTAAAYG------HT 414
            .:..|..     ||..:|     .|..:.|..||       .:..:|  ..:..|:|      ..
 Worm   285 QIKTIFGIIHDILNPKSE-----LKLSLTLGFPNIGDIAKVSEDLKSSWFKSKVAHGKSVGELEA 344

  Fly   415 GI-----INTLLQKGEKVDVTTNDNYTALHIAVESAKPAVVETLLGFGADVHVRGGKLRETPLHI 474
            |:     ...::::.|:..|....|:|       ::|    :|||.|..|:...|          
 Worm   345 GLDDFFKFGKMIKETERSWVAVRQNFT-------NSK----KTLLQFTTDLEKIG---------- 388

  Fly   475 AARVKDGDRCALMLLKSGASPNLTTDDCLTPVHVAARHGNLATLMQ------------------L 521
              ..|.||:.|..|                        .||..:.|                  |
 Worm   389 --NYKGGDKDAEEL------------------------KNLKRVFQQQDWTETFGKNFIKNADKL 427

  Fly   522 LEDEGDPLYKSNTGETPLHMACRACHPDIVRHLIETVKEKHGPDKATTYINSVNEDGATALHYTC 586
            ||.:|.....:|..:: ||         :||...|.:.:            |::.....:|....
 Worm   428 LEVKGKLEIMNNVMKS-LH---------VVRRNAEEIPK------------SIDTAALQSLFTQL 470

  Fly   587 QITKEEVKIPESDKQIVRMLLENGADVTLQTKTALETAFHYCAVAGNNDVLMEMISHM-NPTDIQ 650
            :....:....||.|.|.:  |.|       .|:.||....:..:..:...|.|.::.: |.:|.|
 Worm   471 KAMPSQSDDSESIKAIEK--LNN-------LKSLLELGDKFRMLHTSQKNLNERVTQLKNISDFQ 526

  Fly   651 KAMNRQSSVGWTPLLIACHRGHMELVNNLLANHARVDVFDTEGRSAL--HLAAERGYLHVCDALL 713
            |:::....:               ||.:.||.:. :.:..::....|  |..::|.|      ..
 Worm   527 KSVHTAKDI---------------LVKSSLAKNI-IGIMHSDFNKLLEVHKFSKRFY------EF 569

  Fly   714 TN-------KAFINSKSRVGRTALHLAAMNGFTHLVKFLIKDHNAVIDILTLRKQTPLHLAAASG 771
            ||       |.|:...||:.:||                |...|.|.||....|::  |....|.
 Worm   570 TNYFKNNKPKVFLECVSRLRKTA----------------IDGENFVKDIQKTYKKS--HKTLESD 616

  Fly   772 QMEVCQL------LLELGANI----DATDDLGQKPIHVAAQNNYSEVAKLFLQQHPSLVNATSKD 826
            ...|.:|      :|.||..:    :.|:.|..: :.:.|..||:.|       |..:|. .:||
 Worm   617 SSPVLKLEDPQKVVLTLGRGMFVLKEMTEALTYR-LRLMAVLNYTRV-------HEKVVK-YNKD 672

  Fly   827 GNTCAH-----------IAAMQGSVKVIEELMKFDRSGVISARNKLTDATPLQLAAEGGHADV-- 878
            .|....           |..:||..|...::...|   ::..:|.|.:||.:     .|..:|  
 Worm   673 LNVQQFFENPTTPIKTLIMDLQGLNKYAVQVKNDD---LLVLKNILDEATKV-----NGFREVFK 729

  Fly   879 --VKALVRAGASCTEE----NKAGFTAVHLAAQNGHGQVLDVLKSTNSLRINSKKL-GLTPLHVA 936
              .|.|::......:|    .|.....:|.|||.||.....:  |.|.|......: ||...|  
 Worm   730 PAYKQLLKTPKLFPKEIRNIEKLSKLDLHFAAQKGHLHAASL--SFNDLETYFDTIFGLDHKH-- 790

  Fly   937 AYYGQADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLHLAAFSGNENVVRLLLNSAGVQ 1001
               .:|:...:.|.::...:....    .||..:....|.||      ||.:|.:...|...|.:
 Worm   791 ---EEAEVQTDYLPAIGLCIGIFI----ILFIVVFVVYGRTP------SGRQNFINWYLYYFGKE 842

  Fly  1002 VDAATIENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTGLHIAAMHGHIQMVEILLGQ 1066
            .|                         ...|......:..::|...|..||...:...|...:.:
 Worm   843 AD-------------------------FQKRWRYSFFTDRQDGNNALVDAAQDINATNVLKAVKK 882

  Fly  1067 GAEINATDRNGWTPLHCAAKAGHLEVVKLLCEAGASPKSETNYGCAAIWFAASEGHNEVLRYLMN 1131
            ||.|:...:.|.||||.|:|:|:.|:|::|.:.||. ::..|            ..|:....|:.
 Worm   883 GAYIDVYSKYGNTPLHVASKSGYPEIVEILIKNGAD-RTLLN------------AQNKTAEQLIP 934

  Fly  1132 KEHDTYGLMEDKRFVYNLMVVSKNHNNK---------PIQEF-VLVSPAPVDTAAKLSNI----Y 1182
            ..:.|......:|:....::..|....|         |:..: :.:....:|   ::||.    :
 Worm   935 PNYKTTDPESIERYEKIKLIFKKYQKKKFRRRLPDVFPVSSYKIYIDEQAID---QMSNSFMERF 996

  Fly  1183 IVLSTKEKERA-KDLVAAGKQCEAMATELLALAAGSDSAGKIL-----------QATDKRNVEFL 1235
            |.::|.|...: ...:....:...:.|:...|.:...|...|:           ::..|::..: 
 Worm   997 IAITTDETSLSITHFIVKTDENGTLVTDAFQLLSWVLSGVLIMKNSWMKDCLGNESLIKKDYNY- 1060

  Fly  1236 DVLIEN-EQKEVIAHTVVQRYLQELWHGSLTWASWKILLL-----LVAFIVCPPVWIGF------ 1288
              .:|| :.|..:.:||:|      |  |.::|..::|.|     :|..|.|..  ||.      
 Worm  1061 --FVENIKFKGAVYNTVLQ------W--SESFAKGEMLFLHGVYAVVVSIDCSN--IGAITAIVT 1113

  Fly  1289 --------TFPMGHKFNKVPIIKFMSYLTSHIYLMIHLSIVGITPIYPV 1329
                    .||....||          :.||.||..||.     |::.:
 Worm  1114 NNGGVMCEKFPEKKNFN----------IGSHPYLHAHLG-----PLFVI 1147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786 5/27 (19%)
Ank_2 131..228 CDD:289560 12/96 (13%)
ANK 155..319 CDD:238125 22/168 (13%)
ANK repeat 159..186 CDD:293786 4/26 (15%)
ANK repeat 232..265 CDD:293786 6/32 (19%)
Ank_2 237..331 CDD:289560 17/99 (17%)
ANK 263..387 CDD:238125 26/136 (19%)
ANK repeat 267..298 CDD:293786 6/35 (17%)
ANK repeat 300..331 CDD:293786 7/31 (23%)
Ank_2 305..398 CDD:289560 21/100 (21%)
ANK 329..454 CDD:238125 26/151 (17%)
ANK repeat 367..398 CDD:293786 7/35 (20%)
ANK repeat 400..431 CDD:293786 6/43 (14%)
Ank_2 405..498 CDD:289560 19/103 (18%)
ANK 428..555 CDD:238125 27/144 (19%)
ANK repeat 433..463 CDD:293786 8/29 (28%)
ANK repeat 469..499 CDD:293786 5/29 (17%)
ANK 496..641 CDD:238125 26/162 (16%)
ANK repeat 501..532 CDD:293786 7/48 (15%)
Ank_2 507..616 CDD:289560 21/126 (17%)
ANK repeat 534..575 CDD:293786 6/40 (15%)
ANK repeat 577..616 CDD:293786 7/38 (18%)
Ank_2 625..722 CDD:289560 18/106 (17%)
ANK 654..780 CDD:238125 26/140 (19%)
ANK repeat 660..690 CDD:293786 4/29 (14%)
ANK repeat 692..723 CDD:293786 8/39 (21%)
Ank_2 697..790 CDD:289560 25/111 (23%)
ANK 720..847 CDD:238125 32/147 (22%)
ANK repeat 725..757 CDD:293786 7/31 (23%)
ANK repeat 759..790 CDD:293786 8/40 (20%)
Ank_5 779..834 CDD:290568 14/69 (20%)
ANK 787..915 CDD:238125 32/146 (22%)
ANK repeat 792..824 CDD:293786 7/31 (23%)
ANK repeat 861..893 CDD:293786 8/39 (21%)
Ank_4 865..915 CDD:290365 13/57 (23%)
Ank_4 929..995 CDD:290365 13/65 (20%)
ANK repeat 932..972 CDD:293786 5/39 (13%)
ANK 969..1096 CDD:238125 28/126 (22%)
ANK repeat 974..1007 CDD:293786 9/32 (28%)
Ank_2 979..1074 CDD:289560 15/94 (16%)
ANK repeat 1009..1041 CDD:293786 1/31 (3%)
ANK 1039..1159 CDD:238125 27/119 (23%)
ANK repeat 1043..1074 CDD:293786 8/30 (27%)
Ank_2 1048..1135 CDD:289560 23/86 (27%)
ANK repeat 1076..1101 CDD:293786 11/24 (46%)
ANK repeat 1109..1134 CDD:293786 2/24 (8%)
Ion_trans <1393..1598 CDD:278921
lido-18NP_001367413.1 WSN 40..107 CDD:197734 17/75 (23%)
Ank_2 835..918 CDD:403870 24/107 (22%)
ANK repeat 859..890 CDD:293786 8/30 (27%)
Ank 892..927 CDD:394980 14/47 (30%)
ANK repeat 892..923 CDD:293786 13/31 (42%)
BRCT 968..1048 CDD:214602 11/82 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4177
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.