DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompC and trpc6b

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:XP_002665445.2 Gene:trpc6b / 102725535 ZFINID:ZDB-GENE-081030-19 Length:858 Species:Danio rerio


Alignment Length:966 Identity:208/966 - (21%)
Similarity:363/966 - (37%) Gaps:314/966 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   924 NSKKLGLTPLH----VAAYYGQADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLHLAAF 984
            |::...|:|..    .||.||....:|.:|..:|..                             
Zfish    57 NARYNNLSPTEERFLEAAEYGNIPVIRRMLEELPEL----------------------------- 92

  Fly   985 SGNENVVRLLLNSAGVQVDAATIENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTG-- 1047
              |.|.|..:               |.|.|.||....|:.|        .|||..::...|.|  
Zfish    93 --NVNCVDYM---------------GQNALQLAVANEHLEV--------TELLLKKENLARIGDA 132

  Fly  1048 LHIAAMHGHIQMVEILLGQGAEINAT------------------DRNGW------TPLHCAAKAG 1088
            |.:|...|:|::||.:|...|..:.|                  |.:|.      ||:..|:...
Zfish   133 LLLAISKGYIRIVEAILSHQAFADTTKLTSSPLQAETQDDFFAYDEDGTRFSHDITPIILASHCH 197

  Fly  1089 HLEVVKLLCEAGASPKSETNY-----GCAAIWFAASEGHNEVLRYLMNKEHDTYGLMEDKRFVYN 1148
            ..|:|.:|...||......:|     ||                 |.::.||::           
Zfish   198 EYEIVHILLRKGACIARPHDYFCKCNGC-----------------LYHQRHDSF----------- 234

  Fly  1149 LMVVSKNHNNKPIQEFV-LVSPA--------PVDTAAKLSNIYIVLSTKEKERAKDLVAAGKQCE 1204
                  :|:...|..:. |.|||        ||.||.:|||...||:..|||...|......||:
Zfish   235 ------SHSRSRINAYKGLASPAYLSLSSEDPVLTALELSNELAVLANIEKEFKNDYKTLSMQCK 293

  Fly  1205 AMATELL----------ALAAGSDSAGKILQATDKRNVEFLDVLIENEQKEVIAHTVVQRYLQEL 1259
            .....||          |:..|...||......|:.|:..|.:.|:.|.|:.:||...|:.|..:
Zfish   294 DFVVGLLDLCRNTEEVEAILNGDTEAGGHFDKGDRPNLVRLKLAIKYELKKFVAHPNCQQQLLSI 358

  Fly  1260 WHGSLTWASWKI----LLLLVAFIVCPPV-----WIGFTFPMGHKFNKVPIIKFMSYLTSHIYLM 1315
            |:.:|:....:.    ||:::..:|..|:     ||..:..:| |..:.|.:||:::..| ..:.
Zfish   359 WYENLSGLRQQTTAVKLLVVLGVVVGLPILALLYWIAPSSKLG-KIIRGPFLKFVAHAAS-FTIF 421

  Fly  1316 IHLSIVGI------TPIYP----------VLRLSLVPY-WYEVGLLIWLSGLLLFELTNPSDKSG 1363
            :.|.|:..      |.:.|          :.|:...|: |.|:.::.|:.|::..|.   .:...
Zfish   422 LGLLIMNAADRFEGTSLLPNMTIHDHPSQLFRMKTTPFTWMEMLIISWVVGMIWAEC---KEIWS 483

  Fly  1364 LGSIKVLV---LLLGMAGVGVHVSAFL--------------FVSKEY------------------ 1393
            ||..:.|:   .||....:.:.|::|:              :|.|.|                  
Zfish   484 LGPREYLLEPWNLLDFGMLAIFVTSFIARFMAFYHANVAQNYVDKRYTDLSNITLPLEIEYYRLA 548

  Fly  1394 ---W----PTLVYCRNQCFALAFLLACVQILDFLSFHHLFGPWAIIIGDLLKDLARFLAVLAIFV 1451
               |    |.|:  ....:|:|.:|:..:|...|..:..|||..|.:|..:||:.:|   :.||:
Zfish   549 RVHWVPSDPQLI--SEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKF---MVIFI 608

  Fly  1452 FGFSMHIVALNQSFANFSPEDLRSFEKKNRNRGYFSDDDMPTPRPPPVENYVDSRFSEFRRKHKD 1516
            ..|...::.:         .:|.|:.:..:..|.|:          .||                
Zfish   609 MVFVAFMIGM---------FNLYSYYRGAKQNGAFT----------TVE---------------- 638

  Fly  1517 DLRMHPINSFELLFFAVFGQTTTEQTQVDKIKNVATPTQPYWVEYLFKIVFGIYMLVSVVVLINL 1581
                   .||:.||:|:||        :.::|:|.......::|.:..:::|:|.:..|:||:|:
Zfish   639 -------ESFKTLFWAIFG--------LSEVKSVVINNGHKFIENIGYVLYGVYNVTMVIVLLNM 688

  Fly  1582 LIAMMSDTYQRIQAQSDIEWKFGLSKL-IRNMHRTTTAPSPLNLVTTWFMWIVEKVKARMKKKKR 1645
            ||||:::::|.|:..:|:||||..:|| ........|.|.|.||:.:     .:.|.:...:.||
Zfish   689 LIAMINNSFQEIEDDADVEWKFARAKLWFSYFEEGGTLPVPFNLIPS-----PKSVISLAMRLKR 748

  Fly  1646 PSLVQMMGIRQASPRTKAGAKWLSKIKKDSVALSQVHLSPLGSQASFSQANQ---NRIENVADWE 1707
            ..|:.:...::             .:|:|:      .|:..|.|...|:.|.   :|.:.:  .:
Zfish   749 LLLIPLHRHKE-------------DLKEDT------ELNESGKQKESSEKNSPHTSRYQRI--MK 792

  Fly  1708 AIAKKY--RALVGDEEG-----GSLKDSDAESGS------QEGSGGQQPPAQVGRR 1750
            .:.|:|  :|.. |:||     |.||:...:..|      :|.|...:..|::.||
Zfish   793 RLIKRYVIKAQT-DKEGDEVNEGELKEIKQDISSLRFELLEEKSRQTEELAELVRR 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560
ANK 720..847 CDD:238125
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
Ank_5 779..834 CDD:290568
ANK 787..915 CDD:238125
ANK repeat 792..824 CDD:293786
ANK repeat 861..893 CDD:293786
Ank_4 865..915 CDD:290365
Ank_4 929..995 CDD:290365 12/69 (17%)
ANK repeat 932..972 CDD:293786 8/43 (19%)
ANK 969..1096 CDD:238125 31/152 (20%)
ANK repeat 974..1007 CDD:293786 3/32 (9%)
Ank_2 979..1074 CDD:289560 24/114 (21%)
ANK repeat 1009..1041 CDD:293786 10/31 (32%)
ANK 1039..1159 CDD:238125 28/150 (19%)
ANK repeat 1043..1074 CDD:293786 11/50 (22%)
Ank_2 1048..1135 CDD:289560 23/115 (20%)
ANK repeat 1076..1101 CDD:293786 7/30 (23%)
ANK repeat 1109..1134 CDD:293786 4/29 (14%)
Ion_trans <1393..1598 CDD:278921 48/229 (21%)
trpc6bXP_002665445.2 trp 50..829 CDD:273311 203/946 (21%)
ANK 73..206 CDD:238125 38/186 (20%)
ANK repeat 100..131 CDD:293786 11/53 (21%)
ANK repeat 179..210 CDD:293786 7/30 (23%)
TRP_2 220..279 CDD:285535 20/92 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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