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Protein Alignment nompC and ankrd42

DIOPT Version :9

Sequence 1:	NP_523483.2	Gene:	nompC / 33768	FlyBaseID:	FBgn0016920	Length:	1761	Species:	Drosophila melanogaster
Sequence 2:	XP_002942124.2	Gene:	ankrd42 / 100498077	XenbaseID:	XB-GENE-5888011	Length:	514	Species:	Xenopus tropicalis

Alignment Length:	594	Identity:	137/594 - (23%)
Similarity:	232/594 - (39%)	Gaps:	138/594 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   722 KSRVGRTALHLAAMNGFTHLVKFLIKDHNAVIDILTLRKQTPLHLAAASGQMEVCQLLLELGANI 786
            |.|:..| :|.|...|....:..:::....:.|...|.|.||||.||.||.:|....||..||::
Frog    15 KKRIYGT-IHEAVRGGDVEQLAAIVQSGTGINDPDPLHKFTPLHWAAHSGSLECLHWLLWHGADV 78

  Fly   787 DATDDLGQKPIHVAAQNNYSEVAKLFLQQHPSLVNATSKDGNTCAHIAAMQGSVKVIEELMKFDR 851
            .                                 :.|:: |.|.||:||::|....::.|:.  .
Frog    79 S---------------------------------DVTTR-GWTAAHLAAIRGQDACMQALIV--N 107

  Fly   852 SGVISARNKLTDATPLQLAAEGGHADVVKALVRAGASCTEENKAGFTAVHLAAQNGHGQVLDVLK 916
            ...:||::. ....|..|||..||:..:::::|:|......::.|:..||.||.:|....|.:|.
Frog   108 GADLSAKDD-RHCCPAHLAAAHGHSFTLQSVLRSGVDINSSDRTGWKPVHYAAFHGRLGCLQLLF 171

  Fly   917 STNSLRINSKKLGLTPLHVAAYYGQADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLHL 981
            ...:...::...|..|.|:||..|....::.|::...:..:....|..         :|.||..|
Frog   172 RWGATLEDADLNGNIPAHLAAMEGHLHCLKFLVSKASSVTRVLEATNM---------NGETPKDL 227

  Fly   982 AAFSGNENVVRLLLNSAGVQVDAATIENGYN---PLHLACFGGHMSVVGLLLSRSAELLQSQDRN 1043
            |.....:|:|:.:   .||:.:....:...|   |.|:|.|.|.:..:..|:......:..:|..
Frog   228 ARKLYKDNIVQYI---DGVEYERDHPDEQENLAFPAHVAAFKGDLVTLRKLVESGIININERDDK 289

  Fly  1044 GRTGLHIAAMHGHIQMVEILLGQGAEINATDRNGWTPLHCAAKAGHLEVVKLLCEAGASPKSETN 1108
            |.|.||.||..|.::.::.||..||:.|.|:..|.||...|.:...|..||||   |.:
Frog   290 GATPLHKAAGQGQLECLQWLLEMGADYNITNEAGETPKDVAKRFAKLAAVKLL---GGN------ 345

  Fly  1109 YGCAAIWFAASEGHNEVLRYLMNKEHDTYGLMEDKRFVYNLMVVSKNHNNKPIQEFVLVSPAPVD 1173
                    .|.|..:|.|    |.|...|       |..:.:..|.:|.:
Frog   346 --------VAGEDSDEEL----NDEDPAY-------FERHGVEGSTDHPD--------------- 376

  Fly  1174 TAAKLSNIYIVLSTKEKERAKDLVAAGKQCEAMATELLALAAGS-DSAGKILQATDKRNVEFLDV 1237
                    |:.||..||::|:  ..|.|:.:.: .:|:.:|.|: ...|.||:..::|..|..:
Frog   377 --------YLSLSESEKQQAR--ARAYKRIKDV-EKLMEVAKGNYKQLGGILEEDNQRKREQKE- 429

  Fly  1238 LIENEQKEVIAHTVVQR------------YLQELWHGSLTWASWKILLLLVAFIVCPPVWIGFTF 1290
             .|::.||:......:|            |..|:.|.|.:....:           ||     :.
Frog   430 -YESQIKELEGQLEYERLRREKMELQLDEYRAEIAHLSKSLEKMR-----------PP-----ST 477

  Fly  1291 PMGHKFNKV 1299
            |.|.|.:.|
Frog   478 PSGEKLSDV 486

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.