DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompC and sowahc

DIOPT Version :10

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:XP_004911856.1 Gene:sowahc / 100492838 XenbaseID:XB-GENE-6040120 Length:455 Species:Xenopus tropicalis


Alignment Length:339 Identity:83/339 - (24%)
Similarity:119/339 - (35%) Gaps:91/339 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   856 SARNKLTDATPLQLAAEGGHADVVKALVR-------AGASCTEENKAGFTAVHLAAQN--GH--- 908
            |.|::..|... :||.....|.|....:|       .||..:|.:.:.    |.||..  ||   
 Frog    44 SVRSRFKDIVN-ELATVKEEAGVRYVCLRKKYRESGTGAPSSESSASD----HEAASESPGHSSE 103

  Fly   909 GQVLDVLKSTNSLRINSKKLGLTPLHVAAYYGQADTVRELLTSVPATVKSETPTGQSLFGDLGTE 973
            |:..| |.|..|:.:.....|.         .|....:|...|||.::| :.|....:|    ..
 Frog   104 GESKD-LPSPPSISVTEAPGGA---------AQQPQEKEGNKSVPGSLK-QCPGSPEVF----LP 153

  Fly   974 SGMTP---------------------------------LH-LAAFSGNENVVRLLLNSAGVQVDA 1004
            ||.||                                 || .::.||||.      ...|.....
 Frog   154 SGRTPRGSRRGVRDPVSPQFRRGPPLLRAGMRDSDSSSLHSSSSVSGNEE------EEGGAAHGQ 212

  Fly  1005 ATIENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQD-RNGRTGLHIAAMHGHIQMVEILLGQG- 1067
            |.::...:...|:...|....:..|||....|:..:| ..|.:.||.||.||..:::..||... 
 Frog   213 AALDPVEHAWMLSSCRGRWESLRELLSNEPGLITRRDFITGFSCLHWAAKHGQHELLAALLSYAH 277

  Fly  1068 -----AEINATDRNGWTPLHCAAKAGHLEVVKLLCEAGASPKSETNYGCAAIWFAASEGHNEVLR 1127
                 ..|||....|:|.||.||..|||:|:|||..|..:.....:|.....|           :
 Frog   278 QHRVPVNINARAAGGYTALHLAAMHGHLDVIKLLIGAYDADVDIRDYSGRKAW-----------Q 331

  Fly  1128 YL-MNKEHDTYGLM 1140
            || .:..||..||:
 Frog   332 YLGPSTTHDVQGLV 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANKYR <125..371 CDD:440430
ANK repeat 129..157 CDD:293786
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
ANK repeat 267..298 CDD:293786
ANKYR 281..572 CDD:440430
ANK repeat 300..331 CDD:293786
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK repeat 501..532 CDD:293786
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 599..690 CDD:463710
ANKYR 651..933 CDD:440430 22/88 (25%)
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
ANK repeat 792..824 CDD:293786
ANKYR 843..1144 CDD:440430 83/339 (24%)
ANK repeat 861..893 CDD:293786 9/38 (24%)
ANK repeat 932..972 CDD:293786 8/39 (21%)
ANK repeat 974..1007 CDD:293786 12/66 (18%)
ANK repeat 1009..1041 CDD:293786 6/31 (19%)
TRPV 1035..1684 CDD:454755 36/114 (32%)
ANK repeat 1043..1074 CDD:293786 12/36 (33%)
ANK repeat 1076..1101 CDD:293786 14/24 (58%)
ANK repeat 1109..1134 CDD:293786 4/25 (16%)
sowahcXP_004911856.1 ANKYR <221..>332 CDD:440430 35/121 (29%)
ANK repeat 221..249 CDD:293786 6/27 (22%)
ANK repeat 252..289 CDD:293786 12/36 (33%)
ANK repeat 291..323 CDD:293786 14/31 (45%)
Blue background indicates that the domain is not in the aligned region.

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