Sequence 1: | NP_523483.2 | Gene: | nompC / 33768 | FlyBaseID: | FBgn0016920 | Length: | 1761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002939629.3 | Gene: | trpc4 / 100485338 | XenbaseID: | XB-GENE-1013618 | Length: | 969 | Species: | Xenopus tropicalis |
Alignment Length: | 819 | Identity: | 177/819 - (21%) |
---|---|---|---|
Similarity: | 316/819 - (38%) | Gaps: | 218/819 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 935 VAAYYGQADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLHLAAFS----GNENVVRLLL 995
Fly 996 NSAGVQVDAATIENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTGLHIAAMHGHIQMV 1060
Fly 1061 EILLGQGAEINATDRNGWTPLHCAAK---------------AGHLEVVKLLCEAGASPKSETNYG 1110
Fly 1111 CAAIWFAASEGHNEVLRYLMNKEHDTYGLMEDK---------RFVYNLMVVSKNHNNKPIQEF-V 1165
Fly 1166 LVSPA--------PVDTAAKLSNIYIVLSTKEKERAKDLVAAGKQCEAMATELLALAAGS----- 1217
Fly 1218 -----DSAGKILQATDKRNVEFLDVLIENEQKEVIAHTVVQRYLQELWHGSLTWASWKILLLLVA 1277
Fly 1278 FIVCPPVWIGFTFP-------MGHK-----FNKVPIIKFM----SYLTSHIYLMIHLSIVGIT-- 1324
Fly 1325 ---PIYPVLRLSLVPY-----WYEVGLLIWLSGL--LLFELTNPSDKSGLGSIKVLVLLLGMAGV 1379
Fly 1380 GVHVSAFLFV----SKEYW----PTLVYCRNQCFALAFLLACVQILDFLSFHHLFGPWAIIIGDL 1436
Fly 1437 LKDLARFLAVLAIFVFGFSMHIVALNQSFANFSPEDLRS------FEKKNRNRGYFSDDDMPTPR 1495
Fly 1496 PPPVENYVDSRFSEFRRKHKDDLRMHPINSFELLFFAVFGQTTTEQTQVDKIKNVATPTQPYWVE 1560
Fly 1561 YLFKIVFGIYMLVSVVVLINLLIAMMSDTYQRIQAQSDIEWKFGLSKL-IRNMHRTTTAPSPLNL 1624
Fly 1625 V----TTWFM--WIVEKVKARMKKKKRPSLVQMMGIRQA 1657 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nompC | NP_523483.2 | ANK repeat | 129..157 | CDD:293786 | |
Ank_2 | 131..228 | CDD:289560 | |||
ANK | 155..319 | CDD:238125 | |||
ANK repeat | 159..186 | CDD:293786 | |||
ANK repeat | 232..265 | CDD:293786 | |||
Ank_2 | 237..331 | CDD:289560 | |||
ANK | 263..387 | CDD:238125 | |||
ANK repeat | 267..298 | CDD:293786 | |||
ANK repeat | 300..331 | CDD:293786 | |||
Ank_2 | 305..398 | CDD:289560 | |||
ANK | 329..454 | CDD:238125 | |||
ANK repeat | 367..398 | CDD:293786 | |||
ANK repeat | 400..431 | CDD:293786 | |||
Ank_2 | 405..498 | CDD:289560 | |||
ANK | 428..555 | CDD:238125 | |||
ANK repeat | 433..463 | CDD:293786 | |||
ANK repeat | 469..499 | CDD:293786 | |||
ANK | 496..641 | CDD:238125 | |||
ANK repeat | 501..532 | CDD:293786 | |||
Ank_2 | 507..616 | CDD:289560 | |||
ANK repeat | 534..575 | CDD:293786 | |||
ANK repeat | 577..616 | CDD:293786 | |||
Ank_2 | 625..722 | CDD:289560 | |||
ANK | 654..780 | CDD:238125 | |||
ANK repeat | 660..690 | CDD:293786 | |||
ANK repeat | 692..723 | CDD:293786 | |||
Ank_2 | 697..790 | CDD:289560 | |||
ANK | 720..847 | CDD:238125 | |||
ANK repeat | 725..757 | CDD:293786 | |||
ANK repeat | 759..790 | CDD:293786 | |||
Ank_5 | 779..834 | CDD:290568 | |||
ANK | 787..915 | CDD:238125 | |||
ANK repeat | 792..824 | CDD:293786 | |||
ANK repeat | 861..893 | CDD:293786 | |||
Ank_4 | 865..915 | CDD:290365 | |||
Ank_4 | 929..995 | CDD:290365 | 11/63 (17%) | ||
ANK repeat | 932..972 | CDD:293786 | 4/36 (11%) | ||
ANK | 969..1096 | CDD:238125 | 27/145 (19%) | ||
ANK repeat | 974..1007 | CDD:293786 | 8/36 (22%) | ||
Ank_2 | 979..1074 | CDD:289560 | 18/98 (18%) | ||
ANK repeat | 1009..1041 | CDD:293786 | 2/31 (6%) | ||
ANK | 1039..1159 | CDD:238125 | 30/143 (21%) | ||
ANK repeat | 1043..1074 | CDD:293786 | 9/30 (30%) | ||
Ank_2 | 1048..1135 | CDD:289560 | 21/101 (21%) | ||
ANK repeat | 1076..1101 | CDD:293786 | 7/39 (18%) | ||
ANK repeat | 1109..1134 | CDD:293786 | 6/24 (25%) | ||
Ion_trans | <1393..1598 | CDD:278921 | 51/214 (24%) | ||
trpc4 | XP_002939629.3 | trp | 17..749 | CDD:273311 | 174/803 (22%) |
ANK repeat | 69..133 | CDD:293786 | 16/69 (23%) | ||
ANK repeat | 135..166 | CDD:293786 | 8/35 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |