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Protein Alignment nompC and Ankdd1a

DIOPT Version :9

Sequence 1:	NP_523483.2	Gene:	nompC / 33768	FlyBaseID:	FBgn0016920	Length:	1761	Species:	Drosophila melanogaster
Sequence 2:	XP_006243362.1	Gene:	Ankdd1a / 100362785	RGDID:	1586052	Length:	509	Species:	Rattus norvegicus

Alignment Length:	573	Identity:	152/573 - (26%)
Similarity:	237/573 - (41%)	Gaps:	132/573 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   689 FDTEG----RSALHLAAERGYLHVCDALLTNKAFINSKSRVGRTALHLAAMNGFTHLVKFLIKDH 749
            ::|.|    ...||.|:....:.....||..:..|.:::.|||.|||.||..|....|:.|: :|
  Rat     7 WETHGLLPLERQLHEASRNNQVGKMKELLGKRVNIRARNHVGRVALHWAAGGGHEQAVRLLL-EH 70

  Fly   750 NAVIDILTLRKQTPLHLAAASGQMEVCQLLLELGANIDATDDLGQKPIHVAAQNNYSEVAKLFLQ 814
            .|.:|.:.....|.|.|:|..|.:::.|:|:..||.
  Rat    71 GAAVDDVDSFGMTALLLSAWFGHLQIVQILVNAGAR----------------------------- 106

  Fly   815 QHPSLVNATSKDGNTCAHIAAMQGSVKVIEELMKFDRSGVISARNKLTDATPLQLAAEGGHADVV 879
                 |:..||||.|..|.||.:|.:.|:..:|:......:...:|| ..|....|||.|..|.:
  Rat   107 -----VHWESKDGLTLLHCAAQKGHMPVLAFIMEDLEDVALDHADKL-GRTAFHRAAEHGQLDAL 165

  Fly   880 KALVRAGASCTEENKAGFTAVHLAAQNGHGQVLDVLKSTNSLRINSKKL---GLTPLHVAAYYGQ 941
            ..||.:|...:.::|.|.||:||||..||   :|||:....:.::.::.   |||.||.||....
  Rat   166 DFLVGSGCDHSVKDKDGNTALHLAASQGH---MDVLQRLVDIGLDLEEQNTEGLTALHAAAEGIH 227

  Fly   942 ADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLHLAAFSGNENVVRLLLNSAGVQVDAAT 1006
            ||.|..|| |..:.|.:.|..|.|.|            |.||.||:|::.|.|: .||.:.|.|.
  Rat   228 ADCVVFLL-SAGSNVNALTQKGLSCF------------HYAARSGSEDMSRALV-KAGGRTDVAD 278

  Fly  1007 IENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTGLHIAAMHGHIQMVEILLGQGAEIN 1071
             :.|..|:|||.......:|.||:...:: |.:.|...:|.||:||.|....:.|:||..||:::
  Rat   279 -KQGTTPMHLAVKHNFPGLVQLLIEAHSD-LDAMDIRQQTPLHLAAEHAWQDVAEMLLIAGADLS 341

  Fly  1072 ATDRNGWTPLHCAAKAGHLEVVKLLCEAG--------------------------ASPKSETNYG 1110
            ..|:.|.|.|..||::.|:.:|.::.:|.                          ...:.||...
  Rat   342 LRDKQGKTALAVAARSNHISLVDMIIKADRFYRWEKDHLSCRDDSDLSRKNLTFKQDHRQETQQL 406

  Fly  1111 CAAIWFAASEGHNEVLRYLMNKEHDTYGLMEDKRFVYNLMVVS----------------KNHNNK 1159
            .:.:|..||       |||...|.        |:..|:.....                :.|.::
  Rat   407 RSVLWRLAS-------RYLRPNEW--------KKLAYSWQFTEAHVCAIEQQWTGTRSYQEHGHR 456

  Fly  1160 PIQEFVLVSPAPVDTAAKLSNIYIVLSTKEKERAKDLVAAGKQCEAMATELLA 1212
                .:|:....|.||.|         ...|...:||:|.|::..|.:|..:|
  Rat   457 ----MLLIWLHGVATAGK---------NPSKALFEDLMAIGRRDLAESTRKMA 496

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.