DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and fadD

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_416319.1 Gene:fadD / 946327 ECOCYCID:EG11530 Length:561 Species:Escherichia coli


Alignment Length:574 Identity:175/574 - (30%)
Similarity:276/574 - (48%) Gaps:66/574 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 DPLVYRTIGQQLELSASNFGDVEAIVSCHEGKRYSFKSLLQEADALAAGFRK-LGLQPGDAVGLW 105
            :|..|:::....|.|.:.:.|..|.|:.  |:..:|:.|.:.:.|.||..:: |||:.||.|.|.
E. coli    18 NPDRYQSLVDMFEQSVARYADQPAFVNM--GEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALM 80

  Fly   106 APNYLHWYLGMMGAARAGLTSVGLNPAYQGPEIAYCLNKVNVKAIIAPETF---------KTQNY 161
            .||.|.:.:.:.|..|||:..|.:||.|...|:.:.||.....||:....|         ||...
E. coli    81 MPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQ 145

  Fly   162 YEILRDICPEISDADTGKIRSEKFPHLRSVIIDSNDSLKGALRFDDFLDLASKSEREEVAKMQ-- 224
            :.||..:..::|.| .|.:.:....:::.::  ....|..|:.|        :|......:||  
E. coli   146 HVILTRMGDQLSTA-KGTVVNFVVKYIKRLV--PKYHLPDAISF--------RSALHNGYRMQYV 199

  Fly   225 -KSILPESACNIQFTSGTTGNPKAACLTHHNFVNN--------G--IHVGNRNELEGERICVQVP 278
             ..::||....:|:|.||||..|.|.|||.|.:.|        |  :|.|.      |.:...:|
E. coli   200 KPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATYGPLLHPGK------ELVVTALP 258

  Fly   279 MFHAFGVIISIMAALTKGATMVLPAAGFSPKDSLQAIVNEKC----SVIHGTPTMYVDLVNTQKK 339
            ::|.|.:.|:.:..:..|...:|..   :|:| :..:|.|..    :.|.|..|::..|:|.::.
E. coli   259 LYHIFALTINCLLFIELGGQNLLIT---NPRD-IPGLVKELAKYPFTAITGVNTLFNALLNNKEF 319

  Fly   340 LQVPLGRIKKAVTGG----AIVSPQLIKDVRQVLNVEAVHSVYGLTETTAVIFQSLPGDSSDVVL 400
            .|:....:..:..||    .:|:.:.:|...|.| :|.    |||||...::  |:.....|...
E. coli   320 QQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYL-LEG----YGLTECAPLV--SVNPYDIDYHS 377

  Fly   401 NSVGHLTDHIEAKVVDAEGRCVPFGQPGELCVRGYTTMLGYHDDEEKTKETIGNDRWLRTGDQFV 465
            .|:|......|||:||.:...||.||||||||:|...||||....:.|.|.|.|. ||.|||..|
E. coli   378 GSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNG-WLHTGDIAV 441

  Fly   466 LEANGYGRIVGRLKEMLIRGGENIFPKEIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEG 530
            ::..|:.|||.|.|:|::..|.|::|.||||.:..||.|.|...:|||....||.|..:|..:  
E. coli   442 MDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKK-- 504

  Fly   531 VDPASFTAETLKAYAKGKLAHFKVPRYVIPIDAFPKTTSGKIQKFKLVEAFKAK 584
             || |.|.|:|..:.:.:|..:|||:.|...|..||:..|||.:.:|.:..:.|
E. coli   505 -DP-SLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGK 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 175/573 (31%)
FACL_like_2 229..577 CDD:213284 123/365 (34%)
fadDNP_416319.1 PRK08974 1..560 CDD:236359 175/574 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004397
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X154
SwiftOrtho 1 1.000 - -
65.710

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