DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and caiC

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_414579.4 Gene:caiC / 944886 ECOCYCID:EG11558 Length:517 Species:Escherichia coli


Alignment Length:554 Identity:144/554 - (25%)
Similarity:224/554 - (40%) Gaps:79/554 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 GQQLELSASNFGDV----EAIVSCHEG---KRYSFKSLLQEADALAAGFRKLGLQPGDAVGLWAP 107
            ||.|.....:..||    .|::....|   .|||:..|.||.:..|..|..||::.||.|.|...
E. coli     6 GQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLD 70

  Fly   108 NYLHWYLGMMGAARAGLTSVGLNPAYQGPEIAYCLNKVNVKAIIAPETFKTQNYYEI-------L 165
            |...:.....|.|:.|...|.:|......|.|:.|.......::....|... |.:|       |
E. coli    71 NCPEFIFCWFGLAKIGAIMVPINARLLCEESAWILQNSQACLLVTSAQFYPM-YQQIQQEDATQL 134

  Fly   166 RDICPEISDADTGKIRSEKFPHLRSVIIDSNDSLKGALRFDDFLDLASKSEREEVAKMQKSILPE 230
            |.||                  |..|.:.::|.:      ..|..|  |:::.........:..:
E. coli   135 RHIC------------------LTDVALPADDGV------SSFTQL--KNQQPATLCYAPPLSTD 173

  Fly   231 SACNIQFTSGTTGNPKAACLTHHNFVNNGIHVGNRNELEGERICVQV-PMFHAFGVIISIMAALT 294
            ....|.||||||..||...:||:|....|.:...:..|..:.:.:.| |.||......:.|||.:
E. coli   174 DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFS 238

  Fly   295 KGATMVLPAAGFSPKDSLQAIVNEKCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGGAIVSP 359
            .|||.|| ...:|.:.....:...:.:|....|.|...|:     :|.|          .|....
E. coli   239 AGATFVL-VEKYSARAFWGQVQKYRATVTECIPMMIRTLM-----VQPP----------SANDQQ 287

  Fly   360 QLIKDVRQVLNVE-------------AVHSVYGLTETTAVIFQSLPGDSSDVVLNSVGHLTDHIE 411
            ..:::|...||:.             .:.:.||:|||...|....|||...  ..|:|.:....|
E. coli   288 HRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRR--WPSIGRVGFCYE 350

  Fly   412 AKVVDAEGRCVPFGQPGELCVRGY---TTMLGYHDDEEKTKETIGNDRWLRTGDQFVLEANGYGR 473
            |::.|...|.:|.|:.||:|::|.   |....|..:.:.|.:.:..|.||.|||....:...:..
E. coli   351 AEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFY 415

  Fly   474 IVGRLKEMLIRGGENIFPKEIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGVDPASFTA 538
            .|.|...|:.|||||:...|:|:.:.|||::.:..|:|:.|....|.:.|:|.|.||   .:.:.
E. coli   416 FVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEG---ETLSE 477

  Fly   539 ETLKAYAKGKLAHFKVPRYVIPIDAFPKTTSGKI 572
            |....:.:..:|.||||.|:......|:..||||
E. coli   478 EEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKI 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 144/554 (26%)
FACL_like_2 229..577 CDD:213284 101/361 (28%)
caiCNP_414579.4 caiC 1..517 CDD:181195 144/554 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
32.710

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