DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and AT1G68270

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_176994.1 Gene:AT1G68270 / 843156 AraportID:AT1G68270 Length:535 Species:Arabidopsis thaliana


Alignment Length:547 Identity:131/547 - (23%)
Similarity:229/547 - (41%) Gaps:116/547 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 RYSFKSLLQEADALAAGFRKLGLQPGDAVGLWAPN-----YLHWYLGMMGAARAGLTSVGLNPAY 133
            |:::.........|||....|.:...|.|.:.|||     .:|:.:.|.||.        |||  
plant    39 RFTWPQTYDRCCRLAASLISLNIAKNDVVSVVAPNTPAIYEMHFAVPMAGAV--------LNP-- 93

  Fly   134 QGPEIAYCLNKVNVKAII---APE-TFKTQNYYEILRDICPEISDADTGKIRSEKFPHLRSVIID 194
                |...|:..::..|:   .|: .|..:|:..:.|:|...:|..|...       :|..:.||
plant    94 ----INTRLDATSITTILRHAQPKILFIHRNFEPLAREILHLLSCDDLQL-------NLLVIFID 147

  Fly   195 SNDSLKGA----LRFDDFLDLASKSER--EEVAKMQKSILPESACNIQFTSGTTGNPKAACLTHH 253
            ..:|.|..    |.::..:.:...:..  |.:.::|..   :...::.:|||||.:||...::| 
plant   148 EYNSAKRVSSEELDYESLIQMGEPTSPLVENMFRIQNE---QDPISLNYTSGTTADPKGVVISH- 208

  Fly   254 NFVNNGIHVGNRNELEGERICVQVPMFHAFGVIISIM-------AALTKGATMVLPAAGFSPKDS 311
                .|.::.:...:.|..:.. .|::......:|:.       .:..:|...|     :.|::.
plant   209 ----RGAYLTSLGVIIGWEMST-CPVYLWIFAYVSLQWMDVYMGNSSARGHQCV-----YEPRNP 263

  Fly   312 LQAIVNEKCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGGAIVSPQLIKDVRQVLNVEAVHS 376
            |.  ::.:...:|                         .:|||:.:...|:|.| |.|..:.:| 
plant   264 LD--MSHRSGPVH-------------------------LMTGGSPLPAALVKKV-QRLGFQVLH- 299

  Fly   377 VYGLTETTA-VIFQSLPGDSSDVVLN---------SVGHLT-DHIEAKV------VDAEGRCVPF 424
            ||||||.|. .:|.....:.:.:..|         .:|.|: ..::.|.      |..:|:.:  
plant   300 VYGLTEATGPALFCEWQDEWNRLTENQQMELKARQGLGILSVAEVDVKYNETQESVPHDGKTM-- 362

  Fly   425 GQPGELCVRGYTTMLGYHDDEEKTKETIGNDRWLRTGDQFVLEANGYGRIVGRLKEMLIRGGENI 489
               ||:.::|...|.||..:.:.|.|...:. ||.|||..|:..:|:..|..|.|:::|.|||||
plant   363 ---GEIVMKGNNIMKGYLKNSKATFEAFKHG-WLNTGDVGVIHPDGHIEIKDRSKDIIISGGENI 423

  Fly   490 FPKEIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGV-----DPASFTA--ETLKAYAKG 547
            ...|:|:.|..||:|.|..|:.:|....||..||::.|::|.     |...|.|  :.|..|.:.
plant   424 SSVEVENILYKHPRVFEVAVVAMPHRVWGETPCAFIVLQKGETNKEDDEYKFVAREKELIDYCRE 488

  Fly   548 KLAHFKVPRYVIPIDAFPKTTSGKIQK 574
            .|.||..||.|:.::..||..:|||.|
plant   489 NLPHFMCPRKVVFLEELPKNGNGKILK 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 131/547 (24%)
FACL_like_2 229..577 CDD:213284 96/377 (25%)
AT1G68270NP_176994.1 PLN03102 1..535 CDD:215576 131/547 (24%)
ttLC_FACS_AEE21_like 11..520 CDD:213326 131/547 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 64 1.000 Domainoid score I3650
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X154
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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