DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12512 and LACS3

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_176622.1 Gene:LACS3 / 842748 AraportID:AT1G64400 Length:665 Species:Arabidopsis thaliana


Alignment Length:631 Identity:136/631 - (21%)
Similarity:230/631 - (36%) Gaps:164/631 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 IVSCHEGKR--YSFKSLLQEADALAAGFRKLGLQPGDAVGLWAPNYLHWYLGMMGAARAGLTSVG 128
            ||....||.  .::|.:......|....|.:|:..||..|::..|...|.:.|......||..|.
plant    69 IVDGKAGKYVWQTYKEVHNVVIKLGNSIRTIGVGKGDKCGIYGANSPEWIISMEACNAHGLYCVP 133

  Fly   129 LNPAYQGPEIAYCL------------NKVNVKAIIAPETFKTQNYYEILRDICPEISDADTGKIR 181
            |........|.:.:            ||::.....||::.|...|.....::        |...|
plant   134 LYDTLGAGAIEFIICHAEVSLAFAEENKISELLKTAPKSTKYLKYIVSFGEV--------TNNQR 190

  Fly   182 SEKFPHLRSVIIDSNDSLKGALRFDDFLDLASKSEREEVAKMQKSILPE----SACNIQFTSGTT 242
            .|...|..::           ..:|.||.|......|         |||    ..|.|.:|||||
plant   191 VEAERHRLTI-----------YSWDQFLKLGEGKHYE---------LPEKRRSDVCTIMYTSGTT 235

  Fly   243 GNPKAACLTHHNFVNNGIHVGNRNELEGERICVQ---------------VPMFHAFG-------- 284
            |:||...||:.:.    ||:     |||.:..::               :|:.|.|.        
plant   236 GDPKGVLLTNESI----IHL-----LEGVKKLLKTIDEELTSKDVYLSYLPLAHIFDRVIEELCI 291

  Fly   285 --------------VIISIMAALTKGATMVLPA------AGFSPKDSLQAIVNEKC--------- 320
                          ::|..:|||.......:|.      .|...|.|....|.:|.         
plant   292 YEAASIGFWRGDVKILIEDIAALKPTVFCAVPRVLERIYTGLQQKLSDGGFVKKKLFNFAFKYKH 356

  Fly   321 -SVIHGTPTMYVDLVNTQ---KKLQVPLGRIKKAVTGGAIVSPQLIKDVRQVLNVEAVHSVYGLT 381
             ::..|.|......:..:   ||::..||...:.:..||......|:...:|:....|...||||
plant   357 KNMEKGQPHEQASPIADKIVFKKVKEGLGGNVRLILSGAAPLAAHIESFLRVVACAHVLQGYGLT 421

  Fly   382 ETTAVIFQSLPGDSSDVVLNSVGHLTDHIEAKV--VDAEGRCVPFGQP-GELCVRGYTTMLGYHD 443
            |:....|.|:|.:.|  :|.:||....:::.::  |...|.......| ||:|:||.|...||:.
plant   422 ESCGGTFVSIPNELS--MLGTVGPPVPNVDIRLESVPEMGYDALASNPRGEICIRGKTLFSGYYK 484

  Fly   444 DEEKTKETIGNDRWLRTGDQFVLEANGYGRIVGRLKEML-IRGGENIFPKEIEDFLNAHPQVI-- 505
            .|:.|:| :..|.||.|||....:.:|..:|:.|.|.:. :..||.:..:.:|: :.:|...|  
plant   485 REDLTQE-VFIDGWLHTGDVGEWQPDGAMKIIDRKKNIFKLSQGEYVAVENLEN-IYSHVAAIES 547

  Fly   506 --------EAHVIGV------------PDERLG---EEVCAYVRLEEGVDPASFTAETLKAYAKG 547
                    |::::.|            .:.::.   |.:|...:.:|      |........||.
plant   548 IWVYGNSYESYLVAVVCPSKIQIEHWAKEHKVSGDFESICRNQKTKE------FVLGEFNRVAKD 606

  Fly   548 -KLAHFKVPRYV----IPIDAFPKTTSGKIQKFKLVEAFKAKETEL 588
             ||..|::.:.|    :|.|         :::..:..::|.|..:|
plant   607 KKLKGFELIKGVHLDTVPFD---------MERDLITPSYKMKRPQL 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 136/631 (22%)
FACL_like_2 229..577 CDD:213284 98/441 (22%)
LACS3NP_176622.1 PLN02614 5..660 CDD:166255 136/631 (22%)
LC-FACS_euk 75..655 CDD:213293 134/625 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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