DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and AT5G16340

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_197138.1 Gene:AT5G16340 / 831495 AraportID:AT5G16340 Length:550 Species:Arabidopsis thaliana


Alignment Length:578 Identity:154/578 - (26%)
Similarity:231/578 - (39%) Gaps:103/578 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LELSASNFGDVEAIVSCHEGKR--YSFKSLLQEADALAAGFRKLGLQPGDAVGLWAPNYLHWYLG 115
            ||.:|:.:||..:||   .|..  |:::........:|:....:|:...|.|.:.:||....|..
plant    20 LERAATVYGDCTSIV---YGSNTVYTWRETNLRCLRVASSLSSIGIGRSDVVSVLSPNTPAMYEL 81

  Fly   116 MMGAARAGLTSVGLNPAYQGPEIAYCLNKVNVKAIIAPETFKTQNYYEILRDICPE-ISDADTGK 179
            ......:|.....:|.......::..|.....|.:.. :.|..        |:..| :|...|. 
plant    82 QFAVPMSGAILNNINTRLDARTVSVLLRHCESKLLFV-DVFSV--------DLAVEAVSMMTTD- 136

  Fly   180 IRSEKFPHLRSVIIDSN---------DSLKGALRFDDFLDLASKSEREEVAKMQKSILPESACN- 234
                  |.:..||.|..         |..|.:..:||.::.....        .|.|.|||..: 
plant   137 ------PPILVVIADKEEEGGVADVADLSKFSYTYDDLIERGDPG--------FKWIRPESEWDP 187

  Fly   235 --IQFTSGTTGNPKAACLTHHNFVNNGIHVGNRNEL------EGERICVQVPMFHAFGVIISIMA 291
              :.:|||||..||.....|     .||.|.:.:.|      :.......:|:||:.|.......
plant   188 VVLNYTSGTTSAPKGVVHCH-----RGIFVMSVDSLIDWAVPKNPVYLWTLPIFHSNGWTNPWGI 247

  Fly   292 ALTKGATMVLPAAGFSPKDSLQAIVNEKCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGGAI 356
            |...|..:.|  ..|......:.|.:...:.:.|.|.:...|..||:  ..||......:|.|  
plant   248 AAVGGTNVCL--RKFDAPLIYRLIRDHGVTHMCGAPVVLNMLSATQE--SQPLNHPVNILTAG-- 306

  Fly   357 VSPQLIKDVRQVLNVEAVHSV----YGLTETTAVI--------FQSLPGDSSDVV-------LNS 402
             ||   .....:|..|::..|    ||||||..||        :..||  :||..       :.:
plant   307 -SP---PPATVLLRAESIGFVISHGYGLTETAGVIVSCAWKPKWNHLP--ASDRARLKARQGVRT 365

  Fly   403 VGHLTDHIEAKVVDAE--------GRCVPFGQPGELCVRGYTTMLGYHDDEEKTKETIGNDRWLR 459
            ||    ..|..|||.|        |..|     ||:.:||.:.||||..|...|::.:.|. |..
plant   366 VG----FTEIDVVDPESGLSVERNGETV-----GEIVMRGSSVMLGYLKDPVGTEKALKNG-WFY 420

  Fly   460 TGDQFVLEANGYGRIVGRLKEMLIRGGENIFPKEIEDFLNAHPQVIEAHVIGVPDERLGEEVCAY 524
            |||..|:.::||..|..|.|:::|.||||:...|:|..|...|.|.|..|:..|||..||..||:
plant   421 TGDVGVIHSDGYLEIKDRSKDIIITGGENVSSVEVETVLYTIPAVNEVAVVARPDEFWGETPCAF 485

  Fly   525 VRLEEGVDPASFTAETLKAYAKGKLAHFKVPRYVIPIDAFPKTTSGKIQKFKLVEAFK 582
            |.|:.|.. ...|.|.|..|.:.|:..:.||:.|..:|..||:::||:.||.|.:..|
plant   486 VSLKNGFS-GKPTEEELMEYCRKKMPKYMVPKTVSFMDELPKSSTGKVTKFVLRDIAK 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 154/578 (27%)
FACL_like_2 229..577 CDD:213284 117/383 (31%)
AT5G16340NP_197138.1 PRK08162 2..542 CDD:236169 153/576 (27%)
ttLC_FACS_AEE21_like 12..539 CDD:213326 153/573 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 64 1.000 Domainoid score I3650
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X154
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

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