DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and 4CL5

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_188760.3 Gene:4CL5 / 821677 AraportID:AT3G21230 Length:570 Species:Arabidopsis thaliana


Alignment Length:546 Identity:147/546 - (26%)
Similarity:243/546 - (44%) Gaps:74/546 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SNFGDVEAIVSC----HEGKRYSFKSLLQEADALAAGFRKLGLQPGDAVGLWAPNYLHWYLGMMG 118
            |..||.::..:|    ..|:..::..:......:|||..:||::.||.|.|..||...:.|..:.
plant    53 SGDGDGDSSTTCIIDGATGRILTYADVQTNMRRIAAGIHRLGIRHGDVVMLLLPNSPEFALSFLA 117

  Fly   119 AARAGLTSVGLNPAYQGPEIAYCLNKVNVKAIIAPETF--KTQNYYEILRD----ICPEISDADT 177
            .|..|..|...||.|..||||........|.||..:..  |..|   :..|    :|.: .|.|.
plant   118 VAYLGAVSTTANPFYTQPEIAKQAKASAAKMIITKKCLVDKLTN---LKNDGVLIVCLD-DDGDN 178

  Fly   178 GKIRSEKFPHLRSVIIDSNDSLKGALRFDDFLDLASKSEREEVAKMQKSILPESACNIQFTSGTT 242
            |             ::.|:|.  |.:.|.:.      ::.:|...::..|.||....:.::||||
plant   179 G-------------VVSSSDD--GCVSFTEL------TQADETELLKPKISPEDTVAMPYSSGTT 222

  Fly   243 GNPKAACLTHHNFVNNGIHVGNRNELEGER-----------ICVQVPMFHAFGVIISIMAALTKG 296
            |.||...:||     .|:......:::||.           :|. :||||.:.:...:::|:..|
plant   223 GLPKGVMITH-----KGLVTSIAQKVDGENPNLNFTANDVILCF-LPMFHIYALDALMLSAMRTG 281

  Fly   297 ATMVLPAAGFSPKDSLQAIVNEKCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGGAIVSPQL 361
            |.::: ...|.....::.|...|.:|:...|.:.:..:.:.:..:..|..::..::|.|.:..:|
plant   282 AALLI-VPRFELNLVMELIQRYKVTVVPVAPPVVLAFIKSPETERYDLSSVRIMLSGAATLKKEL 345

  Fly   362 IKDVRQVLNVEAVHSVYGLTETTAVI---------FQSLPGDSSDVVLNSVGHLTDHIEAKVVDA 417
            ...||...........||:||:..|.         |::..|....|:.|:        |.||||.
plant   346 EDAVRLKFPNAIFGQGYGMTESGTVAKSLAFAKNPFKTKSGACGTVIRNA--------EMKVVDT 402

  Fly   418 E-GRCVPFGQPGELCVRGYTTMLGYHDDEEKTKETIGNDRWLRTGDQFVLEANGYGRIVGRLKEM 481
            | |..:|..:.||:||||:..|.||.:|.|.|..||..|.||.|||...::.:....||.||||:
plant   403 ETGISLPRNKSGEICVRGHQLMKGYLNDPEATARTIDKDGWLHTGDIGFVDDDDEIFIVDRLKEL 467

  Fly   482 LIRGGENIFPKEIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGVDPASFTAETLKAYAK 546
            :...|..:.|.|:|..|.:||.:.:|.|:.:.||...|...|:|...:|   :..|.:.:|:|..
plant   468 IKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQG---SQLTEDDVKSYVN 529

  Fly   547 GKLAHFKVPRYVIPIDAFPKTTSGKI 572
            .::.|:|..:.|..|:..||..||||
plant   530 KQVVHYKRIKMVFFIEVIPKAVSGKI 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 147/546 (27%)
FACL_like_2 229..577 CDD:213284 104/365 (28%)
4CL5NP_188760.3 PLN02246 20..567 CDD:215137 147/546 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X154
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.710

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