DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and dip2bb

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_009300851.1 Gene:dip2bb / 568954 ZFINID:ZDB-GENE-100729-4 Length:1615 Species:Danio rerio


Alignment Length:601 Identity:120/601 - (19%)
Similarity:208/601 - (34%) Gaps:152/601 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LLQEADALAAG-FRKLGLQPGDAVGLWAPNYLHWYLGMMGAARAGLTSVGLNPAYQG------PE 137
            |.:.|:.:||. ..:.|:..|:.|.|..|..:.......|...||...|.:.|.:..      |.
Zfish  1066 LHKRAEKIAAALMERSGINIGENVVLLYPPGIDLIAAFYGCLYAGCIPVTVRPPHPQNLSATLPT 1130

  Fly   138 IAYCLNKVNVKAIIAPETFKTQNYYEILRDICPEISDADTGKIRSEKFPHLRSVIIDSNDSLKGA 202
            :...::......|:.     ||...:|||      |......:..:.:|    :|||::|     
Zfish  1131 VRMIIDVSKAACILT-----TQVLTKILR------SKEAAATVNIKTWP----IIIDTDD----- 1175

  Fly   203 LRFDDFLDLASKSEREEVAKMQKSILPESACNIQFTSGTTGNPKAACLTHHNFVNNGIHVGNRNE 267
                        ..|:....:.|....|....:.|:..|||......::|.........:..:.|
Zfish  1176 ------------LPRKRPPTIYKPPNAEMIAYLDFSVSTTGMLTGVKISHAAVSALCRSIKLQCE 1228

  Fly   268 LEGER-ICVQVPMFHAFGVIISIMAALTKGATMVL---------------PAAGFSPKDSLQAI- 315
            |...| |.:.:..:...|.::..:|::..|...:|               ..:.:..:|:..:. 
Zfish  1229 LYSSRQIAICLDPYCGLGFVLWCLASVYSGHQSILIPPMELETSLTLWLGTLSQYRIRDTFCSYS 1293

  Fly   316 VNEKCSVIHGTPTMY-----VDLVNTQKKLQVPLGRIKKAVTGGAIVSPQLIKDVRQVLNVEAVH 375
            |.|.|:...|..|..     |:|...:..:.:...|.:.|:|..   ..:|.||:.  |::.||.
Zfish  1294 VMELCTKGLGGQTELLKARGVNLSCVRSCVVIAEERPRLALTHS---FSKLFKDIG--LSMRAVS 1353

  Fly   376 SVYGLTETTAVIFQSLPGDSSDVV------------------------LNSVGHLTDHIEAKVVD 416
            :.:|.....|:..|...|.....|                        |...|.:...:...:|:
Zfish  1354 TAFGSRVNLAICLQGTTGPDPSTVYVDMKSLRHDRVRLVERGAPQSLPLMESGTILPGVRVVIVN 1418

  Fly   417 AEGRCVPFGQP--GELCVR------GYTTMLGYHD---DEEKTKETIGNDR--WLRTGD-QFV-- 465
            .|.| .|.|..  ||:.|.      ||.|:.|..:   |...||.:.|:.:  |.|||. .||  
Zfish  1419 PETR-GPLGDSHLGEIWVNSPHNATGYYTIYGEENLQADHFNTKLSFGDPQTLWARTGYLGFVKR 1482

  Fly   466 ---LEANGYGR----IVGRLKEMLIRGGENIFPKEIEDFLN-AHPQVIEA------HVIGVPDER 516
               .:|:|...    :||.|.|.|...|....|.:||..:: ||..:.|:      :::.|..|.
Zfish  1483 TELTDASGDRHDALFVVGYLDETLELRGLRYHPIDIETSVSRAHRSIGESAVFTWTNLLVVVAEL 1547

  Fly   517 LGEE--------VCAYVRLEEGVDPASFTAETLKAYAKGKLAHFKVPRYVIPID--AFPKTTSGK 571
            .|.|        :...|.|||                     |..:...|:.:|  ..|..:.|:
Zfish  1548 CGSEQDALDLVPLVTNVVLEE---------------------HHLIVGVVVIVDPGVIPINSRGE 1591

  Fly   572 IQKFKLVEAFKAKETE 587
            .|:..|.::|.|.:.:
Zfish  1592 KQRMHLRDSFLADQLD 1607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 120/601 (20%)
FACL_like_2 229..577 CDD:213284 88/433 (20%)
dip2bbXP_009300851.1 DMAP_binding 9..137 CDD:283995
Dip2 391..955 CDD:213273
AFD_class_I 1052..1604 CDD:327384 119/596 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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