DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and slc27a1b

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001070716.1 Gene:slc27a1b / 553512 ZFINID:ZDB-GENE-061013-672 Length:648 Species:Danio rerio


Alignment Length:648 Identity:148/648 - (22%)
Similarity:247/648 - (38%) Gaps:157/648 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LQTISR--YMLRQKCAFNSMRSISTSMPSLISHKHHIGKDPLVYRTIGQQLELSASNFGDVEAIV 67
            ||.:.|  :.:||     .:|:.|| :|||.:.:  :...|                  :..|:|
Zfish    60 LQVLLRVKFYMRQ-----YIRNRST-IPSLFAQR--VALHP------------------EKAALV 98

  Fly    68 SCHEGKRYSFKSLLQEADALAAGFRKLGLQPGDAVGLW---APNYLHWYLGMMGAARAGLTSVGL 129
            ....|:.:||..|.:.::|:|......|.:.||.|.::   .|..:..:|||        ..||:
Zfish    99 DESSGEVWSFSELDRRSNAVAQWVLAQGWRSGDVVAIFMESRPQMVALWLGM--------AKVGV 155

  Fly   130 NPAYQGPEIAYCLNKVNVKAIIAPETFKTQNYYEILRDI---CPEISDADTGKIRSEKFPHLRSV 191
            .||.           :|               :.:.||.   |..:|.| .|.:...:   |..|
Zfish   156 EPAL-----------IN---------------FNLRRDSLIHCMGVSGA-CGMVFGAE---LLDV 190

  Fly   192 IIDSNDSLKGALRFD------DFLDLASKSEREEVAKMQKSILPESACNIQF--------TSGTT 242
            :::..:||:....|.      :.||..|.::.:.:........|..|.|..|        |||||
Zfish   191 VLEVRESLRSLSLFSCGSAPAEMLDSLSAADLDALLSKSPETPPAVAHNKGFNDRLFYIYTSGTT 255

  Fly   243 GNPKAACLTHHNFVNNGIHVGNRNELEGERI--CVQVPMFHAFGVIISIMAALTKGATMVLPAAG 305
            |.||||.:.|..:............|:.:.:  |. :|::|:.|.||.:...|..|.|:|: ...
Zfish   256 GLPKAAIVVHSRYYRIAAFSYYSFGLQPDDVVYCC-LPLYHSAGNIIGVGQCLLHGLTVVI-RRK 318

  Fly   306 FSPKDSLQAIVNEKCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGGAIVSPQLIKDVRQVLN 370
            ||........|...|:|:.....:...|::...:....|.|::.|:..|  :.|.:.:...:..:
Zfish   319 FSASRFWDDCVKYNCTVVQYIGEICRYLLSQPVRPSESLHRVRVAMGNG--LRPNVWESFMKRFS 381

  Fly   371 VEAVHSVYGLTETTAVI-----------FQSLPGDSSDVVLNSVGHL------TDHIEAKVVDAE 418
            |:.:...||.||....:           |.|       |||.||..:      .|.:|. :.|:.
Zfish   382 VKRIGEFYGATECNCSLANMDNKVGACGFNS-------VVLPSVYPIRLLRADEDTMEL-IRDSR 438

  Fly   419 GRCVPF--GQPGELCVR-----------GYTTMLGYHDDEEKTKETIGNDRWLR------TGDQF 464
            |.|||.  |:||.:..|           ||.       :||.|.:.|.::.:.:      :||..
Zfish   439 GLCVPCKPGEPGIIVGRINPQDPLRRFDGYA-------NEEATSKKISHNVFRKGDSAYVSGDLM 496

  Fly   465 VLEANGYGRIVGRLKEMLIRGGENIFPKEIEDFLNAHPQVIEAHVIGVP----DERLGEEVCAYV 525
            |::..||.....|..:.....|||:...|:|..|:|..:..:..|.||.    :.:.|....|  
Zfish   497 VMDELGYVYFRDRGGDTFRWRGENVSTTEVEGVLSALLKQTDVAVYGVSVPGVEGKAGMAAIA-- 559

  Fly   526 RLEEGVDPAS-FTAETLKAYAKGKLAHFKVPRYVIPIDAFPKTTSGKIQKFKL-VEAFKAKET 586
                  ||.: |..||.....:..|..:..|.::.......||.:.||||.:| .|.|...:|
Zfish   560 ------DPENVFDCETFLRDVQNALPSYARPVFLRLSPEVDKTGTFKIQKTRLQKEGFDPHQT 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 137/608 (23%)
FACL_like_2 229..577 CDD:213284 97/398 (24%)
slc27a1bNP_001070716.1 PRK08279 60..648 CDD:236217 148/648 (23%)
AFD_class_I 103..613 CDD:302604 133/574 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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