DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and Acsf3

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_574249.5 Gene:Acsf3 / 498962 RGDID:1586037 Length:583 Species:Rattus norvegicus


Alignment Length:626 Identity:160/626 - (25%)
Similarity:255/626 - (40%) Gaps:129/626 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SISTSMPSLISHKHHI-----------GKDPLVYRTIGQQLELSASNFGDVEAIVSCHEGKRYSF 77
            |:::|..:...|:.|.           |..|:..|.:.         |||..|::..|  .|:::
  Rat    15 SLASSRLTARRHRGHSLLHTAPEARTDGSAPVFIRALA---------FGDRVALIDKH--GRHTY 68

  Fly    78 KSLLQEADALAAGFRKL-GLQPGD----AVGLWAPNYLHWYLGMMGAARAGLTSVGLNPAYQGPE 137
            :.|...:..||.....| |.:.||    .|.....|.:.:.:....:..:|..:|.|...:...:
  Rat    69 RELYDRSLCLAQEICSLRGCKVGDLQEERVSFLCSNDVSYVIAQWASWMSGGVAVPLYRKHPEAQ 133

  Fly   138 IAYCLNKVNVKAIIAPETFKTQNYYEILRDICPEISDADTGKIRSEKFPHLRSVIIDSNDSLKGA 202
            :.|.:.......::.     .|.|.|.|..:..        ::.....|...:|       ..||
  Rat   134 LEYFIQDSRSSVVVV-----GQEYLERLSPLAQ--------RLGVPLLPLTPAV-------YHGA 178

  Fly   203 LRFDDFLDLASKSEREEVAKMQKSILPESACNIQFTSGTTGNPKAACLTHHNF---VNNGIH--V 262
                        :|:.....:|:....:....|.:||||||.||.|..||.|.   |...:|  .
  Rat   179 ------------AEKPIEQPIQEREWRDRGAMIFYTSGTTGRPKGALSTHRNLAAVVTGLVHSWA 231

  Fly   263 GNRNELEGERICVQVPMFHAFGVIISIMAALTKGATMV-LPAAGFSPKDSLQAIVNEKCSVIH-- 324
            ..:|::    |...:|:.|..||:..::..|..|||.| ||.  ||.:...:..::.:...|:  
  Rat   232 WTKNDV----ILHVLPLHHVHGVVNKLLCPLWVGATCVMLPE--FSAQQVWEKFLSSEAPQINMF 290

  Fly   325 -GTPTMYVDLVN------TQKKLQ-----VPLGRIKKAVTGGAIVSPQLIKDVRQVLNVEAVHSV 377
             ..||:|..|::      ||..:|     |...||:..|:|.|.:...|::..:....    |::
  Rat   291 MAVPTIYSKLLDYYDRHFTQSHVQDFVRAVCKERIRLMVSGSAALPVPLLEKWKSATG----HTL 351

  Fly   378 ---YGLTETTAVIFQSL-----PGDSSDVVLNSVGHLTDHIEAKVVD------------AEGRC- 421
               ||:||....:...|     ||        |||.....:|.::|.            |||.. 
  Rat   352 LERYGMTEIGMALSNPLTEARVPG--------SVGTPLPGVEVRIVSENPQKGSSYTIHAEGNMR 408

  Fly   422 ---VPFG---QPGELCVRGYTTMLGYHDDEEKTKETIGNDRWLRTGDQFVLEANGYGRIVGRLKE 480
               |..|   :.|||.|:|.:....|.|..|:||.....|.|.||||..|.:.:.|. |.||...
  Rat   409 GTKVTPGFEEKEGELLVKGPSVFQEYWDKPEETKSAFTPDGWFRTGDTAVFKDDRYW-IRGRTSV 472

  Fly   481 MLIR-GGENIFPKEIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGVDPASFTAETLKAY 544
            .:|: ||..:...|||..|.|||.:.:..||||||...|:.|.|.|.|:||   .|.:...||.:
  Rat   473 DIIKTGGYKVSALEIERHLLAHPSITDVAVIGVPDMTWGQRVTAVVALQEG---HSLSHRDLKEW 534

  Fly   545 AKGKLAHFKVPRYVIPIDAFPKTTSGKIQKFKLVEAFKAKE 585
            |:|.||.:.||..::.::|.|:...||:.|.:|::.|...|
  Rat   535 ARGVLAPYAVPSELLLVEAIPRNQMGKVNKKQLLQQFYPSE 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 155/596 (26%)
FACL_like_2 229..577 CDD:213284 121/395 (31%)
Acsf3XP_574249.5 CaiC 49..572 CDD:223395 152/587 (26%)
MCS 55..564 CDD:213307 147/564 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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