DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and CG6178

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster


Alignment Length:560 Identity:158/560 - (28%)
Similarity:242/560 - (43%) Gaps:58/560 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 RTIGQQLELSASNFGDVEAIVSCHEGKRYSFKSLLQEADALAAGFRKLGLQPGDAVGLWAPNYLH 111
            |::||.:.....:|||...:|....|..||...:.:....||...:|||::..|.|||.:.|.::
  Fly    25 RSLGQYILDKYKSFGDRTVLVDAVNGVEYSASFMHKSIVRLAYILQKLGVKQNDVVGLSSENSVN 89

  Fly   112 WYLGMMGAARAGLTSVGLNPAYQGPEIAYCLNKVNVKAIIAPETFKTQNYYEILRDICPEISDAD 176
            :.|.|......|.|...||..|...|:.:.:|....|.|.|                 .:|:...
  Fly    90 FALAMFAGLAVGATVAPLNVTYSDREVDHAINLSKPKIIFA-----------------SKITIDR 137

  Fly   177 TGKIRSE-KFPHLRSVIIDSNDSLKGALRFDDFLDLASKSEREEVAKMQKSILP-----ESACNI 235
            ..|:.|: ||  ::.:|..|..|.|    |.:..||....|.|:.........|     |....|
  Fly   138 VAKVASKNKF--VKGIIALSGTSKK----FKNIYDLKELMEDEKFKTQPDFTSPAANKDEDVSLI 196

  Fly   236 QFTSGTTGNPKAACLTHHNFVNNGIHVGNRNE-----LEGERICVQVPMFHAFGVIISIMAALTK 295
            ..:|||||.||...||..|.:..   :.::.:     :|...:...:|.|||||.:..|..|...
  Fly   197 VCSSGTTGLPKGVQLTQMNLLAT---LDSQIQPTVIPMEEVTLLTVIPWFHAFGCLTLITTACVG 258

  Fly   296 GATMVLPAAGFSPKDSLQAIVNEKCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGGAIVSPQ 360
            ...:.||.  |..|..|.||...:..:....|.:.|.|.......:..|..:...:.|.|.:|.:
  Fly   259 ARLVYLPK--FEEKLFLSAIEKYRVMMAFMVPPLMVFLAKHPIVDKYDLSSLMVLLCGAAPLSRE 321

  Fly   361 LIKDVRQVLNVEAVHSVYGLTETT-AVIFQS----LPGDSSDVVLNSVGHLTDHIEAKVVDAE-G 419
            ....:::.:.|..:...|||:|:| :|:.|:    .||        |||.|...|.|||:|.: |
  Fly   322 TEDQIKERIGVPFIRQGYGLSESTLSVLVQNDEFCKPG--------SVGVLKVGIYAKVIDPDTG 378

  Fly   420 RCVPFGQPGELCVRGYTTMLGYHDDEEKTKETIGNDRWLRTGDQFVLEANGYGRIVGRLKEMLIR 484
            :.:...:.||||.:|...|.||..|.:.|:..| .|.||.|||....:.:....||.|:||::..
  Fly   379 KLLGANERGELCFKGDGIMKGYIGDTKSTQTAI-KDGWLHTGDIGYYDDDFEFFIVDRIKELIKY 442

  Fly   485 GGENIFPKEIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGVDPASFTAETLKAYAKGKL 549
            .|..:.|.|||..|..:.::.:|.|||.|||..||...|:|..:..|   ..|...:..:.....
  Fly   443 KGYQVPPAEIEALLLTNDKIKDAAVIGKPDEEAGELPLAFVVKQANV---QLTENEVIQFVNDNA 504

  Fly   550 AHFKVPR-YVIPIDAFPKTTSGKIQKFKLVEAFKAKETEL 588
            :..|..| .||.:|..||..||||.:..|.|..|.::::|
  Fly   505 SPAKRLRGGVIFVDEIPKNPSGKILRRILREMLKKQKSKL 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 158/560 (28%)
FACL_like_2 229..577 CDD:213284 108/364 (30%)
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 155/550 (28%)
Firefly_Luc_like 43..529 CDD:213279 147/525 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X154
43.710

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