DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and CG17999

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster


Alignment Length:584 Identity:134/584 - (22%)
Similarity:250/584 - (42%) Gaps:88/584 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KHHIGKDPLVYRTIGQQLELSASNFGDVEAIVSCH-EGKRYSFKSLLQEADALAAGFRKLGLQPG 99
            |...|.:..:...|.:.|:::|.     :.:..|. .|:..:...|.|::..:|..|::|||:.|
  Fly    20 KDFYGPEMTLGEVIMRVLQINAD-----QVMQICDTTGQELTGAQLAQQSARIAQAFKRLGLRRG 79

  Fly   100 DAVGLWAPNYLHWYLGMMGAARAGLTSVGLNPAYQGPEIAYCLNKVNVKAIIAPETFKTQNYYEI 164
            |.||:.|.|..:....::.|...|:....|:|.:....:.|..:....|.|..    ..:||: |
  Fly    80 DVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKYMYDITEPKVIFC----DVENYH-I 139

  Fly   165 LRDICPEISDADTGKIRSEKFPHLRSVIIDSNDSLKGALRFDDFLDLASKSEREEVAKMQKSILP 229
            ::.:        .||:::....:|      .|..|:|.|...:.|:       :|.:....:.:|
  Fly   140 IKTV--------NGKLQNPAKIYL------VNGKLEGVLDISEMLN-------DEDSITAAAYVP 183

  Fly   230 ------ESACNIQFTSGTTGNPKAACLTHHNFVNNGIHVGNRNELEGERICVQV-PMFHAFGVII 287
                  :....|..:|||||.||....:|.:.:.|   ..|.|....:.:.:.. |::...|.||
  Fly   184 CPKLHGDHTAFIVCSSGTTGMPKGVTRSHRSLLCN---CKNPNTYTRDSVLLSFSPLYWISGTII 245

  Fly   288 SIMAALTKGATMVLPAAGFSPKDSLQAIVNEKCSVI------------HGTPTMYVDLVNTQKKL 340
             ::|:|..|...::....:|.:..||.:...|.:.:            |.:..|         :|
  Fly   246 -LLASLLNGCRRIITNRPYSVEYLLQLVARHKVTFLFLASHQIALLSKHDSDVM---------EL 300

  Fly   341 QVPLGRIKKAVTGGAIVSPQLIKDVRQVLNVEAVHSVYGLTETTAVIFQSLPGDSSDV--VLNSV 403
            :..|..|:..:..|:.|...:.:.:.:::..:.....|||:|        :.|.|.:|  .:...
  Fly   301 KAQLQSIRVLIGAGSKVCKAVCRRMYELIGNQRFVVGYGLSE--------MGGLSKNVGGPVGCE 357

  Fly   404 GHLTDHIEAKVVDAEGRCVPFGQPGELCVRGYTTMLGYHDDEEKTKETIGND-RWLRTGDQFVLE 467
            |.:..::|.:|:|.....:...:.|.:..|......||:.:.|.|:..:.:| .|.||||...|:
  Fly   358 GKVMRNVELRVLDKLKMPLGINEVGIIYARLRFKWAGYYRNPEATRRALSSDGMWFRTGDIGYLD 422

  Fly   468 ANGYGRIVGRLKEMLIRGGENIFPKEIEDFLNAHPQVIEAHVIGVPDE-RLGEEVCAYVRLE--E 529
            :.||..|..|..::.......|:|::||:|:...|.|.||.|.|:||. ......||.||.:  |
  Fly   423 SEGYLYIQTRDTDVFKFNNFQIYPEQIEEFILRLPGVSEACVFGIPDAVSTNLTACAVVRTKSPE 487

  Fly   530 GVDPASFTAETLKAYAKGKLA---HFKVPRYVIPIDAFPKTTSGKIQKFKLVEAFKAKETELKA 590
            |   ...||:.::...:..|:   |.:...|.  ||:.|||.:.|:|:.|::..  .::.||||
  Fly   488 G---ERLTADHIRNIVEHHLSGAYHIRGGVYF--IDSLPKTPNDKLQRRKVLGL--VQQLELKA 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 132/577 (23%)
FACL_like_2 229..577 CDD:213284 90/375 (24%)
CG17999NP_611517.1 CaiC 25..545 CDD:223395 132/579 (23%)
AFD_class_I 38..529 CDD:302604 124/547 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.