DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and CG8834

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster


Alignment Length:556 Identity:126/556 - (22%)
Similarity:216/556 - (38%) Gaps:110/556 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 DVEAI-VSCHEGKRYSFKSLLQEADALAAGFRKLGLQPGDAVGLWAPNYLHWYLGMMGAA--RAG 123
            ||:.: |:..:|..:|.:        :|...:|.||...|.:|:.|.|  ..|:..:|.|  ..|
  Fly    50 DVDGVTVTFEQGLTWSIR--------IAQYLKKRGLNHKDVIGIAAKN--STYVMPLGVACLMNG 104

  Fly   124 LTSVGLNPAYQG-----------PEIAYC----LNKVNVKAIIA--PETFKTQNYYEILRDICPE 171
            .....:||....           |.:.:|    .:||: ||.:.  ||                 
  Fly   105 TPFHSVNPVLDDATLTHVFSITKPTLIFCDGQEYDKVH-KATVGWHPE----------------- 151

  Fly   172 ISDADTGKIRSEKFPHLRSVIIDSNDSLKGALRFDDFLDLASKSEREEVAKMQKSILPE---SAC 233
                                |:...|.::|....:..||   .:..|::  .|..:|.|   ...
  Fly   152 --------------------ILTLTDHVEGVQGIETLLD---PTTTEKI--YQPEVLKEGGDQTV 191

  Fly   234 NIQFTSGTTGNPKAACLTHHNFVNNG--------IHVGNRNELEGERICVQ-VPMFHAFGVIISI 289
            .|..:|||||.|||.|:::...:.:.        |:||:         |:. :....|| |..::
  Fly   192 AILCSSGTTGLPKAVCISNSILIQDSMLITSQSVIYVGS---------CLDWITGLWAF-VFSTV 246

  Fly   290 MAALTKGATMVLPAAGFSPKDSLQAIVNEKCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGG 354
            .     |.|.::....|:|:..:..:...|.:.....|.....|:.........|..|.....||
  Fly   247 F-----GCTRIISNKAFTPEYFVGLVKKYKINYAVLPPRHLSALITCPDAKPDALAPITHLNYGG 306

  Fly   355 AIVSPQLIKDVRQVLNVEAVHSVYGLTETTAVIFQSLPGDSSDVVLNSVGHLTDHIEAKVVDAEG 419
            ..:|...::..:::......:|.||:||..|:....  |.|:   ::|.|.....|:.::||.:|
  Fly   307 GSISLATLQRSQELCKTAMFNSGYGMTEVGAITINI--GISN---VSSAGRPVPGIKIRIVDEDG 366

  Fly   420 RCVPFGQPGELCVRGYTTMLGYHDDEEKTKETIGNDRWLRTGDQFVLEANGYGRIVGRLKEMLIR 484
            :.:.:.|.||:.|.......||:.:..:|:.....:.|..|||....:...:..||.|.||:|..
  Fly   367 KSLGYNQVGEIYVHTGQAWNGYYGNPVETRRMQDFEGWFHTGDLGYFDEQNFLYIVDRKKEILKY 431

  Fly   485 GGENIFPKEIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGVDPASFTA-ETLKAYAKGK 548
            .|.:.:|.|||..:....||.:..|:|:.|||.|:...|.|...:|   |:.:| |.::..||..
  Fly   432 NGLHYWPTEIETVIAELSQVQDVCVVGIYDEREGDAAGALVVKSKG---ATISAKEIVEHVAKRL 493

  Fly   549 LAHFKVPRYVIPI-DAFPKTTSGKIQKFKLVEAFKA 583
            .|..|..|..:.. |..|...:||..:....:.|.|
  Fly   494 PATQKQLRAGVQFTDKLPANVNGKTMRKTARDVFVA 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 126/556 (23%)
FACL_like_2 229..577 CDD:213284 89/361 (25%)
CG8834NP_610779.1 CaiC 20..529 CDD:223395 125/554 (23%)
AFD_class_I 46..519 CDD:302604 124/544 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386992at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.