DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and ACSM4

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001073923.1 Gene:ACSM4 / 341392 HGNCID:32016 Length:580 Species:Homo sapiens


Alignment Length:612 Identity:154/612 - (25%)
Similarity:249/612 - (40%) Gaps:122/612 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TSMPSLISHKHHIGKDPLVYRTIGQQLELSASNFGDVEAIVSCHE--GKRYSFKS-LLQE----- 83
            |..|....||.|....||              ...|.|||..|:.  .|.::|.: :|.:     
Human    16 TKPPGRRLHKDHQLWTPL--------------TLADFEAINRCNRPLPKNFNFAADVLDQWSQKE 66

  Fly    84 -----------------ADALAAGFRKL---------------GLQPGDAVGLWAPNYLHWYLGM 116
                             .|.:...||:|               |||.||.:.:..|....|:|..
Human    67 KTGERPANPALWWVNGKGDEVKWSFRELGSLSRKAANVLTKPCGLQRGDRLAVILPRIPEWWLVN 131

  Fly   117 MGAARAGLTSVGLNPAYQGPEIAYCLNKVNVKAIIAPETFKTQNYYEILRDICPEISDADTGKIR 181
            :...|.|:..:.........:|.|.|.....|.|:|.|            ::.|.:.....    
Human   132 VACIRTGIIFMPGTIQLTAKDILYRLRASKAKCIVASE------------EVAPAVESIVL---- 180

  Fly   182 SEKFPHLRSVIIDSNDSLKGALRFDDFLDLASKSEREEVAKMQKSILPESACNIQFTSGTTGNPK 246
              :.|.|::.::.|..|..|.|.|.:....||    ||.:.::..  .:....|.|||||||.||
Human   181 --ECPDLKTKLLVSPQSWNGWLSFQELFQFAS----EEHSCVETG--SQEPMTIYFTSGTTGFPK 237

  Fly   247 AACLTHHNFVNNGIHVGNRNELEGERICVQVPMFHAFGVII--------------SIMAALTKGA 297
            .|   .|:..:.||         |..:|.:..:......||              |:.::...||
Human   238 MA---QHSQSSLGI---------GFTLCGRYWLDLKSSDIIWNMSDTGWVKAAIGSVFSSWLCGA 290

  Fly   298 -TMVLPAAGFSPKDSLQAIVNEKCSVIHGTPTMYVDLVNTQKKL-QVPLGRIKKAVTGGAIVSPQ 360
             ..|...|.|.....|..:.....:.:...||:|..||  ||.| :.....::..:|||..::|:
Human   291 CVFVHRMAQFDTDTFLDTLTTYPITTLCSPPTVYRMLV--QKDLKRYKFKSLRHCLTGGEPLNPE 353

  Fly   361 LIKDVRQVLNVEAVHSVYGLTETTAVIFQSLPGDSSDVVLNSVGHLTDHIEAKVVDAEGRCVPFG 425
            :::..|....:| ::..||.|| ..:|..:..|  .::...|:|......:.:::|..|..:|.|
Human   354 VLEQWRVQTGLE-LYEGYGQTE-VGMICANQKG--QEIKPGSMGKGMLPYDVQIIDENGNVLPPG 414

  Fly   426 QPGELCV-----RGYTTMLGYHDDEEKTKETIGNDRWLRTGDQFVLEANGYGRIVGRLKEMLIRG 485
            :.||:.:     |.:.....|.|:.:||..||..|.:: |||:.|::::||...|||..:::|..
Human   415 KEGEIALRLKPTRPFCFFSKYVDNPQKTAATIRGDFYV-TGDRGVMDSDGYFWFVGRADDVIISS 478

  Fly   486 GENIFPKEIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLE---EGVDPASFTAETLKAYAKG 547
            |..|.|.|:|..|..||.|:|:.|:..||:..||.|.|:|.|.   :..:|...|.| |:.:.|.
Human   479 GYRIGPFEVESALIEHPAVVESAVVSSPDQIRGEVVKAFVVLAAPFKSYNPEKLTLE-LQDHVKK 542

  Fly   548 KLAHFKVPRYVIPIDAFPKTTSGKIQK 574
            ..|.:|.||.|..:...|||.:|||::
Human   543 STAPYKYPRKVEFVQELPKTITGKIKR 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 149/596 (25%)
FACL_like_2 229..577 CDD:213284 106/370 (29%)
ACSM4NP_001073923.1 MACS_euk 48..577 CDD:213294 142/566 (25%)
Acs 49..580 CDD:223442 142/565 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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