DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and pdgy

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster


Alignment Length:531 Identity:159/531 - (29%)
Similarity:257/531 - (48%) Gaps:58/531 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 KRYSFKSLLQEADALAAGFR-KLGLQPGDAVGLWAPNYLHWYLGMMGAARAGLTSVGLNPAYQGP 136
            ::|:|..:...:.|.|...: |..||..|.:.:..||...:.:..:||..||||...:||.|...
  Fly   101 RQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPD 165

  Fly   137 EIAYCLNKVNVKAIIAPET-FKTQNYYEILRDICPEISDADTGKIRSEKFPHLRSVIIDSNDSL- 199
            |||..|.....|.::...: |.|             :|.|  .|:...:.| :..|...:.::| 
  Fly   166 EIARQLTFSGAKFLVGTVSGFAT-------------LSQA--SKLVGRQIP-IAVVRTSAEEALP 214

  Fly   200 KGALRFDDFLDLAS-KSEREEVAKMQKSILPESACNIQFTSGTTGNPKAACLTHHNFVNNGIHV- 262
            :||:   ||.:|.| ::.|.|..|..|....:....:.|:|||||.||...|:|:|..:|...| 
  Fly   215 EGAI---DFSELTSTQNVRYEDLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQ 276

  Fly   263 --------GNRNELEGERICVQVPMFHAFGVIISIMAALTKGATM-VLPAAGFSPKDSLQAIVNE 318
                    |.:|.|.|     .:|.||.:|:.:.:::.|.:|..: .:|.  |.|.|.::::...
  Fly   277 ASLPLDLMGPQNTLPG-----VLPFFHIYGLTVVMLSKLGQGCRLATMPC--FKPDDFMRSLDKY 334

  Fly   319 KCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGGAIVSPQLIKDVRQVLNVEAVHSV----YG 379
            :.|:::..|.:.:.::|..|..|.....:|..::|.|.:...   ||.:.|| :..::|    ||
  Fly   335 QGSILNLVPPIALFMINHPKLTQETAPHLKVVMSGAAPIGQH---DVERFLN-KFPNTVFKQGYG 395

  Fly   380 LTETTAVIFQSLPGDSSDVVLNSVGHLTDHIEAKVVDAEGRCVPFGQP---GELCVRGYTTMLGY 441
            :||.:.|:..:..|:.   |..|.|.|....|||:|..:|.......|   |||||||...|.||
  Fly   396 MTEASPVVLLTPEGNK---VYASTGVLPASTEAKIVPLDGSDAKGVGPRTTGELCVRGPQVMAGY 457

  Fly   442 HDDEEKTKETIGNDRWLRTGDQFVLEANGYGRIVGRLKEMLIRGGENIFPKEIEDFLNAHPQVIE 506
            .:::|..:.|.....|||:||....:.:|...|..|:||::...|..:.|.|:|..|..||:::|
  Fly   458 LNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVKGFQVPPAELEAVLRDHPKILE 522

  Fly   507 AHVIGVPDERLGEEVCAYVRLEEGVDPASFTAETLKAYAKGKLAHF-KVPRYVIPIDAFPKTTSG 570
            |.|.|:|.|..||...|.|.|.:| :.||  ||.:.||...::||: |:...||.:|..||..:|
  Fly   523 AAVFGIPHEFNGEAPRAIVVLRQG-EKAS--AEEISAYVAERVAHYKKLEGGVIFVDEVPKNPTG 584

  Fly   571 KIQKFKLVEAF 581
            ||.:.:|.|.|
  Fly   585 KILRRELKEKF 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 159/531 (30%)
FACL_like_2 229..577 CDD:213284 114/365 (31%)
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 158/529 (30%)
Firefly_Luc_like 99..587 CDD:213279 155/521 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.815465 Normalized mean entropy S2257
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47353
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R434
SonicParanoid 1 1.000 - - X154
76.690

Return to query results.
Submit another query.