DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and Dip2c

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_038951677.1 Gene:Dip2c / 307067 RGDID:1560155 Length:1626 Species:Rattus norvegicus


Alignment Length:624 Identity:122/624 - (19%)
Similarity:213/624 - (34%) Gaps:188/624 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LLQEADALAAGFRKLG-LQPGDAVGLWAPNYLHWYLGMMGAARAGLTSVGLNPAYQGPE-IAYCL 142
            |.:.|:.:|....:.| ||.||.|.|..|..:.......|...||...:.:.|.:  |: ||..|
  Rat  1067 LHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPH--PQNIATTL 1129

  Fly   143 NKVNVKAIIAPETFKTQNYYEILRDICPEISDADTGKIRSEK---------FPHLRSVIIDSNDS 198
              ..||.|:           |:.|..|...:......:||.:         :|    :|:|::|.
  Rat  1130 --PTVKMIV-----------EVSRSACLMTTQLICKLLRSREAAAAVDVRTWP----LILDTDDL 1177

  Fly   199 LKGALRFDDFLDLASKSEREEVAKMQKSILPESACNIQFTSGTTGNPKAACLTH---HNFVNNGI 260
            .|                 :..|::.|...|::...:.|:..|||......::|   ..|..:  
  Rat  1178 PK-----------------KRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRS-- 1223

  Fly   261 HVGNRNELEGER-ICVQVPMFHAFGVIISIMAALTKG---------------ATMVLPAAGFSPK 309
             :..:.||...| :.:.:..:...|.::..:.::..|               |..:|..:.:..:
  Rat  1224 -IKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPSELETNPALWLLAVSQYKVR 1287

  Fly   310 DSLQAI-VNEKCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGGAIVSPQ------------L 361
            |:..:. |.|.|:...|:.|      .:.|...:.|.|::..|    :|:.:            |
  Rat  1288 DTFCSYSVMELCTKGLGSQT------ESLKARGLDLSRVRTCV----VVAEERPRIALTQSFSKL 1342

  Fly   362 IKDVRQVLNVEAVHSVYGLTETTAVIFQ------------------------------------- 389
            .||:.  |:..||.:.:|.....|:..|                                     
  Rat  1343 FKDLG--LHPRAVSTSFGCRVNLAICLQPHRLWTLAEQGTSGPDPTTVYVDMRALRHDRVRLVER 1405

  Fly   390 ----SLPGDSSDVVLNSVGHLTDHIEAKVVDAEGRCVPFGQP--GELCVR------GYTTMLG-- 440
                |||...|..:|..|..:..:.|.|        .|.|..  ||:.|.      ||.|:.|  
  Rat  1406 GSPHSLPLMESGKILPGVRIIIANPETK--------GPLGDSHLGEIWVHSAHNASGYFTIYGDE 1462

  Fly   441 -YHDDEEKTKETIGNDR--WLRTGDQFVL------EANGYGR----IVGRLKEMLIRGGENIFPK 492
             ...|...::.:.|:.:  |.|||....|      :|||...    :||.|.|.:...|....|.
  Rat  1463 SLQSDHFNSRLSFGDTQTIWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPI 1527

  Fly   493 EIE-DFLNAHPQVIE------AHVIGVPDERLGEEVCAYVRLEEGVDPASFTAETLKAYAKGKLA 550
            :|| ..:.||..|.|      .:::.|..|..|.|       :|.:|........:..      .
  Rat  1528 DIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSE-------QEALDLVPLVTNVVLE------E 1579

  Fly   551 HFKVPRYVIPID--AFPKTTSGKIQKFKLVEAFKAKETE 587
            |:.:...|:.:|  ..|..:.|:.|:..|.:.|.|.:.:
  Rat  1580 HYLIVGVVVVVDIGVIPINSRGEKQRMHLRDGFLADQLD 1618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 122/624 (20%)
FACL_like_2 229..577 CDD:213284 85/452 (19%)
Dip2cXP_038951677.1 DMAP_binding 8..174 CDD:368923
Dip2 392..968 CDD:341231
Dip2 1048..1622 CDD:341231 122/624 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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