DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and Acsm3

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_017177549.1 Gene:Acsm3 / 20216 MGIID:99538 Length:593 Species:Mus musculus


Alignment Length:611 Identity:150/611 - (24%)
Similarity:237/611 - (38%) Gaps:124/611 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MLRQKCAFNSMRSISTSMPSLISHKHHIGKDPLVYRTIGQQLELSASNFGDVEAI-----VSCHE 71
            :||.:|    .:.::...|..:.:|.        |||...|      ||.:.|::     :...|
Mouse     4 LLRARC----FQRLAIPDPMRVLYKD--------YRTATPQ------NFSNYESMKQDFKIEIPE 50

  Fly    72 ------------------GKRYS---FKSLLQEADALAAGFRKLG---------------LQPGD 100
                              |||.|   |..:....:.|...|.:||               ||.||
Mouse    51 YFNFAKDVLDQWTNMEKAGKRLSNPAFWWIDGNGEELRWSFEELGLLSRKFANILTEACSLQRGD 115

  Fly   101 AVGLWAPNYLHWYLGMMGAARAGLTSVGLNPAYQGPEIAYCLNKVNVKAIIAPETFKTQNYYEIL 165
            .|.:..|....|:|..:...|.|...:.........:|.|.|.....|.||..:|          
Mouse   116 RVMVILPKIPEWWLANVACLRTGTVLIPGTTQLTQKDILYRLQSSKAKCIITDDT---------- 170

  Fly   166 RDICPEISDADTGKIRSEKFPHLRSVIIDSNDSLKGALRFDDFLDLASKSEREEVAKMQKSILPE 230
              :.|.: ||...|..     :|.|.:|.|..|.:|.....:.:..||.|......|..:.:.  
Mouse   171 --LAPAV-DAVAAKCE-----NLHSKLIVSQHSREGWGNLKEMMKYASDSHTCVDTKHDEMMA-- 225

  Fly   231 SACNIQFTSGTTGNPKAACLTHHNFVNNGIHVGNRNELEGERICVQVPMFH------AFGVIISI 289
                |.|||||||.||....||.:| ..|:.|..|..|:   :.....|::      |.....|:
Mouse   226 ----IYFTSGTTGPPKMIGHTHSSF-GLGLSVNGRFWLD---LIASDVMWNTSDTGWAKSAWSSV 282

  Fly   290 MAALTKGATM---VLPAAGFSPKDSLQAIVNEKCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAV 351
            .:..|:||.:   .||.  |.....||.:.....:|....||.|..||............:|..|
Mouse   283 FSPWTQGACVFAHYLPR--FESTSILQTLSKFPITVFCSAPTAYRMLVQNDMSRSYKFNSLKHCV 345

  Fly   352 TGGAIVSPQLIKDVRQVLNVEAVHSVYGLTETTAVI--FQSL---PGDSSDVVLNSVGHLTDHIE 411
            :.|..::|::::..|:...:: ::..||.|||..:.  |:.:   ||        |:|..:...:
Mouse   346 SAGEPINPEVMEQWRKKTGLD-IYEGYGQTETVLICGNFKGMKIKPG--------SMGKPSPAFD 401

  Fly   412 AKVVDAEGRCVPFGQPGELCV-----RGYTTMLGYHDDEEKTKETIGNDRWLRTGDQFVLEANGY 471
            .|::|..|..:|.||.|::.:     |.:.....|.|:..||..|:....:: |||:..::.:||
Mouse   402 VKILDENGATLPPGQEGDIALQVLPERPFGLFTHYVDNPSKTASTLRGSFYI-TGDRGYMDEDGY 465

  Fly   472 GRIVGRLKEMLIRGGENIFPKEIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGVDPASF 536
            ...|.|..::::..|..|.|.|:|..|..||.:.|:.|:..||...||.|.|::.|..  |..|.
Mouse   466 FWFVARSDDIILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIRGEVVKAFIVLNP--DYKSH 528

  Fly   537 TAETLK----AYAKGKLAHFKVPRYV 558
            ..|.||    .:.|...|.:|.||.|
Mouse   529 DQEQLKKEIQEHVKKTTAPYKYPRKV 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 145/580 (25%)
FACL_like_2 229..577 CDD:213284 97/353 (27%)
Acsm3XP_017177549.1 AFD_class_I 48..554 CDD:388389 137/547 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.