DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and mec-18

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_508731.3 Gene:mec-18 / 180701 WormBaseID:WBGene00003179 Length:638 Species:Caenorhabditis elegans


Alignment Length:597 Identity:140/597 - (23%)
Similarity:249/597 - (41%) Gaps:86/597 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SNFGDVEAIVSCHEGKRYSFKSLLQEADALAAGFRKLGLQPGDAVGLWAPN-----YLHWYLGMM 117
            |..|...|||....||::.:..:....:..|...::|.:..|..|.:....     ::|     :
 Worm    28 SAHGSNLAIVDVDSGKQWRYSEIRNWCEMCATRLKELQVTSGSRVAVITGTTGQAIFVH-----L 87

  Fly   118 GAARAGLTSVGLNPAYQGPEIAYCLNKVNVKAIIAPETF-----------------KTQNYYEIL 165
            ..:..|.::|.:|......||...::......:|....|                 :.::..:|.
 Worm    88 ACSIIGCSAVAVNGWNAVDEIWTLVDLSEATHLIVENQFMQKADDVRRKAQMRGGGRIKHVRQIE 152

  Fly   166 RDICPEISDADTGKIRS----EKFPHLRSVIIDSNDSLKGALRFDDFLDL--------------- 211
            ..:..|..:.|:.:.||    :|.|.::.:.: :..:|...|. :|..||               
 Worm   153 DVLTAERINVDSARKRSIDVKQKPPLVKEMSL-AKINLTPVLP-EDIADLTSPVSEVSGQSKELN 215

  Fly   212 ----ASKSEREEVAKMQKSILPESACNIQFTSGTTGNPKAACLTHHNFVNNGIHVGNRNELEG-- 270
                :|..:.|||....:.:..::...|.|||||||..|||.|:|.:.:.|...:.  ..|.|  
 Worm   216 GDVESSVVDSEEVQTPIQQVSGQNPLLILFTSGTTGLAKAAELSHRSLIINIQQIS--LPLYGPV 278

  Fly   271 ---ERICVQVPMFHAFGVIISIMAALTKGATMVLPAAGFSPKDS----LQAIVNEKCSVIHGTPT 328
               ||..:.:.:.|.:| |:|...||..||::.|.:     |.|    ::.:||.:.:|:|.||.
 Worm   279 QTKERFLLPLSIAHIYG-IVSAYYALINGASLYLIS-----KQSNRLFMETLVNNQINVMHITPA 337

  Fly   329 ----MYVDLVNTQKKLQVPLGRIKKAVTGGAIVSPQLIKDVRQVLNVEAVHSVYGLTETTAVIFQ 389
                |..|.:....|..    .::..:..||.:.......::..||::.....:|:||...:...
 Worm   338 IVHWMATDAIVDDYKTP----NLRSVLCAGAPIDSNSAAAMKSRLNIKDFRQSFGMTELGGICTM 398

  Fly   390 SLPGDSSDVVLNSVGHLTDHIEAKVVDAEGR--CVPFGQPGELCVRGYTTMLGYHDDEEKTKETI 452
            |   ...|..:.|||:....:..|||:.|.:  |:| .|||::.|.|......|:.:.:.|.|..
 Worm   399 S---PYLDEKIESVGNPLPGMLFKVVNWETKQLCLP-RQPGQIIVLGPQVSPCYYKNPKATSELF 459

  Fly   453 GNDRWLRTGDQFVLEANGYGRIVGRLKEMLIRGGENIFPKEIEDFLNAHPQVIEAHVIGVPDERL 517
            ....:::|||....:..|...::.|:|:::...|..|.|.|:|..|.||..:.:..|:|..|...
 Worm   460 DATGFVKTGDAGFYDEVGRIYVLDRIKDIIKCKGTMICPSEVELVLRAHAGIDDCAVVGRQDHVT 524

  Fly   518 GEEVCAYVRLEEGVDPASFTAETLKAYAKGKLAHFKVPR-YVIPIDAFPKTTSGKIQKFKLVEAF 581
            ||...|:| ::....|...:|| ::.|..||:|.||..| .|..|...|::..|||.:..|.:.:
 Worm   525 GEVPAAFV-VKNAQHPLLASAE-VRQYVSGKIATFKELRGGVFFISEIPRSVCGKILRRNLRQFW 587

  Fly   582 KAKETELKAARL 593
            ..:.|..|...|
 Worm   588 DRERTNSKVDSL 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 139/594 (23%)
FACL_like_2 229..577 CDD:213284 101/363 (28%)
mec-18NP_508731.3 CaiC 12..585 CDD:223395 137/581 (24%)
AFD_class_I 35..579 CDD:302604 133/568 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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