DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12512 and slc27a2b

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001373573.1 Gene:slc27a2b / 100004228 ZFINID:ZDB-GENE-081104-49 Length:616 Species:Danio rerio


Alignment Length:652 Identity:145/652 - (22%)
Similarity:231/652 - (35%) Gaps:188/652 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LRQKCAFNSMRSISTSMPSLISHKHHIGKDPL-VYRTI----GQQLELSASNFGD------VEAI 66
            ||.||            |.:||...::.:..| ||||.    .:........|.|      .:|.
Zfish    15 LRLKC------------PYIISQTKYMCRVALAVYRTTKYIKSKPFYTILDRFQDSVRKNPKKAF 67

  Fly    67 VSCHEGKRYSFKSLLQEADALAAGFRK-LGLQPGDAVGLW---APNYLHWYLGMMGAARAGLTSV 127
            :...: :.||::...:|::.:|....| ..|..||.|.|.   .|.:|..:||:   |:.|.:..
Zfish    68 IRFLD-QTYSYEQSDKESNKIARTLLKHADLHEGDTVALLLGNEPMFLWIWLGL---AKIGCSVA 128

  Fly   128 GLNPAYQGPEIAYCLNKVNVKAIIAPETFKTQNYYEILRDICPEISDADTGKIRSEKFPHLRS-- 190
            .||...:...:.:|........:||                     .||......|..|.||.  
Zfish   129 LLNHNIRSKSLLHCFTCCGANVLIA---------------------GADLQDAVEEVLPALREQG 172

  Fly   191 ---VIIDSNDSLKGALRFDDFLDLASKSEREEVAKMQKSILPESACNIQF--------TSGTTGN 244
               .|:..:.|.:|.....|.:..||          .:.|..:...|:.|        ||||||.
Zfish   173 ISIYILTEHVSSEGMTSLTDKIKQAS----------DQPIPTDLRANVAFNTPAAYIYTSGTTGL 227

  Fly   245 PKAACLTHHNFVNNGIHVGNRNELEGERICVQVPMFHAFGVIISIMAALTKGATMVLPAAGFSPK 309
            ||||.:||..................:.|.|.:|::|:.|..:....::.:|||:|| .:.||..
Zfish   228 PKAAVITHRRLWAMAFFQSICGVKSDDVIYVCLPLYHSSGFGLGFGGSVERGATIVL-RSKFSSS 291

  Fly   310 DSLQAIVNEKCSVIHGTPTMYVD-----LVNTQKKLQVPLGRIKKAVTGGAIVSPQLIKD-VRQV 368
            ...     :.|...:.|...|:.     |.|..|.:...:..::.|:..|  :.|.:.:. :.:.
Zfish   292 QFW-----DDCRKYNVTVIQYIGETMRYLCNMPKCVSDQVHNVRMAIGNG--IRPDIWRTFINRF 349

  Fly   369 LNVEAVHSVYGLTETTAVIFQSLPGDSSDVVLNSVGHLT--------------DH-IEAKVVDAE 418
            .:|| :...||.||.| :.|.:..|.     :.:||.:.              || .|..|.:|:
Zfish   350 GHVE-IKEFYGSTEGT-LGFLNYAGK-----IGAVGTVNSFHKKLYPYVFIKFDHEKEEPVRNAD 407

  Fly   419 GRCVPF--GQPGELCVR--------GY------TTMLGYHDDEEKTKETIGNDRWLRTGDQFVLE 467
            |.|:..  |:.|.|..|        ||      |.....||..||      .|.:..|||.|..:
Zfish   408 GFCIEVAKGETGLLVTRLTQKIEFSGYARDPKQTEKKKLHDVFEK------GDVYFNTGDLFRTD 466

  Fly   468 ANGYGRIVGRLKEMLIRGGENIFPKEIEDFLNAHPQVIEAHVIGVP----DERLG---------- 518
            ...:.....|:.:.....|||:...|:.|.:...|.:.||:|.||.    :.|:|          
Zfish   467 RENFIYFQDRVGDTFRWKGENVSTNEVSDIMTLVPCIEEANVYGVTVPGFEGRIGMAAIILKKDH 531

  Fly   519 ----EEV--------------------------CAYVRL-----EEGVDPASFT------AETLK 542
                ::|                          |.:.:|     |||.:||..|      .||:|
Zfish   532 QFECDDVFNHVTSYLPVYARPRFIRIQSSLAVTCTFKQLKGRLVEEGFNPALITDPLFILDETVK 596

  Fly   543 AY 544
            :|
Zfish   597 SY 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 138/622 (22%)
FACL_like_2 229..577 CDD:213284 96/416 (23%)
slc27a2bNP_001373573.1 hsFATP2a_ACSVL_like 70..606 CDD:341261 130/585 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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