DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12512 and acsm3

DIOPT Version :9

Sequence 1:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001104706.1 Gene:acsm3 / 100002035 ZFINID:ZDB-GENE-080220-22 Length:591 Species:Danio rerio


Alignment Length:614 Identity:151/614 - (24%)
Similarity:258/614 - (42%) Gaps:103/614 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LQTISRYMLRQKCAFNSMRSISTSMPSLISHKHHIGKDPL----VYRTIGQQLELSASNFGDVEA 65
            ||| .|:.......|:...|:.::....:..:.:..||.|    .....||:..|.|..:     
Zfish    30 LQT-CRFKTSAPKNFSDYESMRSTYKIQVPQRFNFAKDVLEKWETKEKSGQRSSLPALWW----- 88

  Fly    66 IVSCHEGK-RYSFKSLLQEADALAAGFRKL-GLQPGDAVGLWAPNYLHWYLGMMGAARAGLTSVG 128
             |:.|..: |:||:.|...:..||...|:: .|:.||.|.|..|....|:|..:...|.|...:.
Zfish    89 -VNDHGTEVRWSFEELGFHSRKLANVLRQVCSLERGDRVFLILPRVPEWWLVNVACIRTGTVLIP 152

  Fly   129 LNPAYQGPEIAYCLNKVNVKAIIAPETFKTQNYYEILRDI---CPEISDADTGKIRSEKFPHLRS 190
            ........::.:.|.....|.:|..||..     .:|..:   ||.||                :
Zfish   153 GTSQLTARDMRHRLITSGAKCVITDETLA-----PLLDTVALDCPSIS----------------T 196

  Fly   191 VIIDSNDSLKGALRFDDFLDLASKSEREEVAKMQKSILPESACNIQFTSGTTGNPKAACLTHHNF 255
            .::.|:..:.|   :.:..:|..:...:.|.....|   |....|.|||||||:||   :|.|:.
Zfish   197 KLLLSHKPMDG---WGNLTELMGRVSDDHVCVDTSS---EEPMTIFFTSGTTGSPK---MTQHSH 252

  Fly   256 VNN--GIHVGNRNELEGERICVQVPMF-------HAFGVIISIMAALTKGATMV---LPAAGFSP 308
            .:.  |:.|..|..|:    ..:..:|       .|.....|:.|...:||.:.   :|.  |..
Zfish   253 CSYGLGLTVNGRYWLD----LTEQDVFWNTSDTGWAKSAWSSVFAPWIQGACVFVHHMPR--FDT 311

  Fly   309 KDSLQAIVNEKCSVIHGTPTMYVDLVN---TQKKLQVPLGRIKKAVTGGAIVSPQLIKDVRQVLN 370
            ...|:.:.:...:.....||.|..||.   ::.|.|.    ::..:..|..::|:::...:::..
Zfish   312 NTVLKTLSHYPITTFCTAPTAYRMLVQDDLSKYKFQA----LEHCLCAGEPINPEVMCKWKELTG 372

  Fly   371 VEAVHSVYGLTETTAV--IFQSL---PGDSSDVVLNSVGHLTDHIEAKVVDAEGRCVPFGQPGEL 430
            :: ::..||.|||..:  .|:.:   ||        |.|..:...:.:|||..|..||.||.|:|
Zfish   373 LD-IYEGYGQTETVLIAGTFKGMKIKPG--------SFGKASPGYDVQVVDENGSVVPKGQEGDL 428

  Fly   431 CV-----RGYTTMLGYHDDEEKTKETIGNDRWLRTGDQFVLEANGYGRIVGRLKEMLIRGGENIF 490
            .:     |.::....|..:..:|.|....|.:| |||:.:::..||...:||..::::..|..|.
Zfish   429 GIRVKPERPFSLFTEYTGEPVRTAECFRGDFYL-TGDRGMMDDEGYLWFIGRSDDVILSAGYRIG 492

  Fly   491 PKEIEDFLNAHPQVIEAHVIGVPDERLGEEVCAYVRLEEGVDPASFTA-------ETLKAYAKGK 548
            |.|:|:.|..||.|.|:.|:..||...||.|.|:|.|     .|.|.:       :.|:.:.|..
Zfish   493 PFEVENALIEHPAVAESAVVSSPDPVRGEVVKAFVVL-----TADFKSRAHKELIKELQTHVKSI 552

  Fly   549 LAHFKVPRYVIPIDAFPKTTSGKIQKFKL 577
            .|.:|.||.:..:|..|||.||||::.:|
Zfish   553 TAPYKYPRKIEFVDQLPKTVSGKIRRVEL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 143/576 (25%)
FACL_like_2 229..577 CDD:213284 103/379 (27%)
acsm3NP_001104706.1 Acs 54..583 CDD:223442 145/589 (25%)
AFD_class_I 57..586 CDD:302604 145/586 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X154
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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