DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ncoa6 and pqn-20

DIOPT Version :9

Sequence 1:NP_001097088.3 Gene:Ncoa6 / 33761 FlyBaseID:FBgn0031698 Length:2467 Species:Drosophila melanogaster
Sequence 2:NP_491945.2 Gene:pqn-20 / 172402 WormBaseID:WBGene00004110 Length:1254 Species:Caenorhabditis elegans


Alignment Length:1424 Identity:349/1424 - (24%)
Similarity:445/1424 - (31%) Gaps:570/1424 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 TTPTSAAPTPPGSKSQFIQPPPPPYPGLGAATASSVSSPIAIAGVSAKPAIVTAPSQLNHPLGHP 303
            :|||:|...||..:...::....  .|:|.||...|.|            ::..||         
 Worm    68 STPTTANTLPPLIEESSVEDETA--DGVGIATEKLVKS------------LIVVPS--------- 109

  Fly   304 PLPTA--TSTGSNNIAISS----------PLLVNLLQ-------NDGNGMSNPNQLKSPQQQQQQ 349
            |..||  ||..||:...|.          ...|:|:|       ...|.:|..:..|..:..:::
 Worm   110 PSDTARVTSAISNDTVASGKTNEEDRKSIDTSVDLIQEREEQEDTGDNQISQQSSSKDHECPERE 174

  Fly   350 SPLIGMSPSGAQMMNS--PMRSSG-PATPSDFL-------------------------------- 379
            ...|...|:.:...:.  |..||| ||:|:|..                                
 Worm   175 DLSIHEEPTNSPTNDGVLPSTSSGIPASPADMTASSRNPLRKVRYSLRLPAKAAQRLKRIANFQP 239

  Fly   380 --------------------MGDVLSPVVP-------SSPTTPQ-------------AAAPP--C 402
                                :.|...|.:|       :.|:|.|             ...||  .
 Worm   240 GSLRRIGLSALKISDMDCLRLADGSPPQIPVALEDHINIPSTSQENPRDIRSLSHQLPMIPPQQP 304

  Fly   403 PPPVVMRNL------QQQQQQHQQAMLS----PSG-NANH----LYTQQQ-------QQGPQQQQ 445
            |||.|..::      |.....|....||    ||| |..|    :..:|:       |..|.||.
 Worm   305 PPPQVPSHMLPSSTGQPGHPSHHMGPLSQQLLPSGPNQGHHSFQVMVKQEPPSQFTPQPHPMQQT 369

  Fly   446 PQQQ---QQGPPHRFQQQHQQMSPQAVALRQQQLQRQQQMR----FMQPQQQLQGQQQPQQQFQP 503
            ||||   |..|..:..|.||        :||...:...|||    ||..|.:   |:.|....||
 Worm   370 PQQQVLPQYPPGMQPHQMHQ--------MRQMTAEEYAQMRAREGFMAAQIK---QEVPSGSGQP 423

  Fly   504 APDCFNNMGMGPMQQQQIRHQLRPGGL--------PLAPP---PPHPQQ---QQQQR-------- 546
            .|      ..|..|.|||..|  ||.|        |.|||   |.:|||   ||||:        
 Worm   424 TP------VPGTPQPQQITPQ--PGSLGPMGSLGPPTAPPGSQPMNPQQQRIQQQQQAAPSASNS 480

  Fly   547 --LMGLSMPQASPQQQFM-SGASPLG------PALSPASSHHSMHSPLMSNHQAQ---QQQQPQM 599
              |:.|...|..||||:| .|.|..|      .|:.....|......::...|.|   ||||.|:
 Worm   481 PLLVNLLSNQQPPQQQYMYPGPSAQGLSMQQIAAIQQQQQHQQYQQRILQQQQQQAMMQQQQQQV 545

  Fly   600 VSPAATPGPTAPSEMAGQ-LMPANQ----HVPAAP--------PPDYNQAAVNSRWPLAGINKPM 651
            ......|.||.|:....| ..|.||    ..|..|        ||.|:||....           
 Worm   546 QQQQQAPPPTTPNPGHPQGFFPTNQAGPPGTPGRPIPPYAMGQPPMYHQAGPQG----------- 599

  Fly   652 DSATKSSFQEFTRYQMQYNLQQQQQQVSLPGQPQQQQQQPQQQQLPPPALPTQQQQQQQS---HV 713
                                |..|:..|.||..||.:..|||.|.|   :|.|||||..:   .:
 Worm   600 --------------------QMIQRMNSYPGNAQQFRPPPQQSQQP---IPPQQQQQPPAPPQQL 641

  Fly   714 QQPQVAGQTQGQVDSLISLSVLDTLTTNDLDALLPTLNCDLDSTLSLEDKNELESLLQDAKDLDL 778
            |||.|.                                   |::...|...:.:...:..|:   
 Worm   642 QQPPVQ-----------------------------------DTSAVAEPPKKKKRPTKKQKE--- 668

  Fly   779 DLIEDNLSAVDMRDALNTLQEAPLEQQQQQQQQQAAMQPQQQTAQMMQMPYQQQPQQQQQMQQQL 843
                             ....|.|||||||||||            ||..|.||.|||::||   
 Worm   669 -----------------AAAAAALEQQQQQQQQQ------------MQAYYGQQQQQQERMQ--- 701

  Fly   844 MMQQQQRQQQLPQM---------------------------QQRQQQHLQRQLQLQQQQQ---QQ 878
            ||||||:|.|:.|.                           |..|||..|:|.|||||:.   ||
 Worm   702 MMQQQQQQGQMVQQPGYPGQGYPGMPPPQGAFPPGYLPGGAQPTQQQIWQQQQQLQQQRMAMFQQ 766

  Fly   879 QQQQLQIVQRQQQ-----QQQSQLQVQHP----------QQPQRP-------------------- 908
            ||.|.|.....||     .||.||.|.:|          .|.|.|                    
 Worm   767 QQAQGQQPGGPQQPMGQWPQQRQLPVPYPPGNNSTPDAVNQQQNPIPGATMQHRLSGEFAPPPVS 831

  Fly   909 -----PQKQFIINPHTGDMEPMASDDSET-------EAEEETAQP--QFRNSHSGLGSFNFNPAN 959
                 ||:|...:.|..|........|.|       ...|.||.|  ..:|:..|.|........
 Worm   832 SGKVHPQQQQQGSFHRSDSSASVYSGSHTPFGQQGPSQSEPTAVPPGPQQNNPGGSGDIGEKAIV 896

  Fly   960 DMLLPT-----NLFSEEDSNSAQQHPMGISSDQ----------ERSR----------DSLASNKS 999
            |.||.:     :|....|.......||.:...|          |||.          |.:||.::
 Worm   897 DQLLNSSEPLADLGDLGDLGDLDIEPMDVQDGQTPSTSNGERNERSDRLAASIELVVDEVASGRA 961

  Fly  1000 ATSRAR---------------------KTPVSKANHS---NFSA----GDNSPRSSNSSPLIGLN 1036
            ....|.                     .||....|.|   |..|    |.|.....|..|...:.
 Worm   962 GAFNAELAAIGERRGSVPIPLPAASPGGTPCVSGNLSHEHNMRAHAFHGANRMIEPNGIPSNAMR 1026

  Fly  1037 SPQSVNANAGGA-------PSKKAKPNLLRGKLQQGVKER---KAKD-----------PTAAPKQ 1080
            ......|...||       ||.:.:|...:|.:.|..:::   |.:|           .|.:.|.
 Worm  1027 LVNGHEAKTNGARRQQQQPPSSQQQPQSQQGGMMQQQQQQQIIKGEDETNDAKIIEFAKTISEKD 1091

  Fly  1081 KRERAKGNVKTKAAEEKIKLRLKLEKVETTPAAGAGYEGQIIINQQQQQTIVVNNHMQQLPMQTQ 1145
            |:.:|....||||...:        |..||..|.....|                 |.|.|.   
 Worm  1092 KKIKAAAESKTKAKATR--------KPRTTKKAAPATIG-----------------MPQPPP--- 1128

  Fly  1146 LLALPTQQQQQQQQQQQQQQQQMQQPQMQISQQQHQQQQQTSQLQQQPAQLQQQQPQ--QQQQQP 1208
                |:|.|||....|.||.||....||.: |||||.......||..|....|..||  ||||..
 Worm  1129 ----PSQIQQQNMPMQHQQMQQHPNAQMMM-QQQHQHPGAGGHLQLHPQMHMQMLPQHHQQQQHH 1188

  Fly  1209 IQQQQQHHPVYSNFQQQQQQQQQQQQNVPGPNEPRVPPLQIRLRGKNHVVVKNTRKDRKKGQNQE 1273
            .:....||.     ||||.|||||...:|..:.|:.||                           
 Worm  1189 EEMMMMHHQ-----QQQQLQQQQQMHQMPLHHLPQQPP--------------------------- 1221

  Fly  1274 ASIDERQLKRSYSDQPPQQLLMDPAESKQAKLTPPPHVNGLPILIQKTTATVASPQLPQ 1332
                           ||.|       :.|..|..||.|  :|     ||.|.|:|..||
 Worm  1222 ---------------PPSQ-------NPQNPLPQPPQV--MP-----TTPTSAAPPQPQ 1251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ncoa6NP_001097088.3 Nucleic_acid_bd <12..>64 CDD:290532
pqn-20NP_491945.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28IB7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.