DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vri and TEF

DIOPT Version :9

Sequence 1:NP_001137792.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_003207.1 Gene:TEF / 7008 HGNCID:11722 Length:303 Species:Homo sapiens


Alignment Length:219 Identity:60/219 - (27%)
Similarity:83/219 - (37%) Gaps:65/219 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 PRPPTGGKEEKLLLLAP-PGKLYPEASVSTAMPEVLSGTPTNSHNKANIAMMNNVRLSNISPTLS 153
            |..||......||.:|. .||  ..||.|||.|      |::|           ..:...|.|:|
Human   111 PASPTHLAHNLLLPVAELEGK--ESASSSTASP------PSSS-----------TAIFQPSETVS 156

  Fly   154 MNGSSNEASNLHPLSMYGGSISPQSN-DSGMSDSLGKYVPGSGYGDGMMAQSPSQGGNGPQSALT 217
            ...||.|.....|..:....:....| :...:|.:...|||.                       
Human   157 STESSLEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGG----------------------- 198

  Fly   218 AAQKELFSQRK-----------------QREFTPDNKKDESYWDRRRRNNEAAKRSREKRRYNDM 265
                |||:.||                 ::.|.||.:|||.||.||::||.||||||:.||..:.
Human   199 ----ELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKEN 259

  Fly   266 VLEQRVIELTKENHVLKAQLDAIR 289
            .:..|...|.|||..|:.::..:|
Human   260 QITIRAAFLEKENTALRTEVAELR 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_001137792.1 bZIP_NFIL3 238..297 CDD:269842 24/52 (46%)
coiled coil 239..297 CDD:269842 23/51 (45%)
TEFNP_003207.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..176 15/60 (25%)
bZIP_HLF 232..290 CDD:269843 24/52 (46%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 235..255 12/19 (63%)
coiled coil 236..287 CDD:269843 21/48 (44%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 256..263 0/6 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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