DRSC/TRiP Functional Genomics Resources

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Protein Alignment vri and dbpb

DIOPT Version :9

Sequence 1:NP_001137792.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_005157954.1 Gene:dbpb / 569109 ZFINID:ZDB-GENE-100922-6 Length:374 Species:Danio rerio


Alignment Length:275 Identity:66/275 - (24%)
Similarity:93/275 - (33%) Gaps:97/275 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NPSNNKFPRIQAQSNNSHLQHQQQLQQKLAQLH----------------------HYSQQKLSGS 84
            |.||:...:|.:||:.|.:.:|.......:..|                      |..|..:..:
Zfish   150 NTSNSTSAQIPSQSSQSAVPNQGSQCLPTSPPHCSSSSSPTSATASSPSLLGLDMHTPQSMMGST 214

  Fly    85 DFPYGPRPPTGGKEEKLLLLAPPGKLYPEASVSTAMPEVLSGTPTNSHNKANIAMMNNVRLSNIS 149
            |..:|               .|||.|.|              ||:.|              |...
Zfish   215 DCLHG---------------TPPGSLEP--------------TPSPS--------------STTC 236

  Fly   150 PTLSMNGSSNEASNLHPLSMYGGSISPQSNDSGMSDSLGKYVPGSGYGDGMMAQSP-----SQGG 209
            |.|....::|....|.|       ..|...|..:|.     ||      |..|..|     |...
Zfish   237 PPLPTPPATNCNELLAP-------FDPDPADVALSS-----VP------GQEAFDPRRHHFSDED 283

  Fly   210 NGPQSALTAAQKELFSQRKQREFTPDNKKDESYWDRRRRNNEAAKRSREKRRYNDMVLEQRVIEL 274
            ..||..:..|:|.|         .|::.|||.||.||.:|||||||||:.||..:..:..|...|
Zfish   284 LKPQPMIKKARKML---------VPEDLKDEKYWSRRCKNNEAAKRSRDARRLKENQISVRAAFL 339

  Fly   275 TKENHVLKAQLDAIR 289
            .:||..|:.::..:|
Zfish   340 ERENAALRQEVADMR 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_001137792.1 bZIP_NFIL3 238..297 CDD:269842 24/52 (46%)
coiled coil 239..297 CDD:269842 23/51 (45%)
dbpbXP_005157954.1 bZIP_HLF 303..362 CDD:269843 24/52 (46%)
coiled coil 304..362 CDD:269843 23/51 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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