DRSC/TRiP Functional Genomics Resources

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Protein Alignment vri and tefb

DIOPT Version :9

Sequence 1:NP_001137792.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001018497.1 Gene:tefb / 553686 ZFINID:ZDB-GENE-050522-224 Length:284 Species:Danio rerio


Alignment Length:221 Identity:51/221 - (23%)
Similarity:81/221 - (36%) Gaps:71/221 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 EASVSTAMPEVLS----------GTPTNSHNKANIA-------MMNNVRLSNISPTLSMNGSSNE 160
            |..:..::.|.||          .|..:|.|....|       .|...:..::|.:.:.....:|
Zfish    71 ENGIPVSLEEELSRGLEAERRDGETQASSENSEEPAAVPEMPEQMQTEQDEDLSDSQTAEQELSE 135

  Fly   161 ASNLHPLSM----YGGSISPQSNDSGMS------DSLGKYVPGSGYGDGMMAQSPSQGGNGPQSA 215
            .:...|.|:    ....:||:..:..:|      |.:...|||.                     
Zfish   136 ETTAEPSSVPERATPSPVSPEDIEVNVSFQPDPTDLVLSSVPGG--------------------- 179

  Fly   216 LTAAQKELFSQRKQR-----------------EFTPDNKKDESYWDRRRRNNEAAKRSREKRRYN 263
                  |||:.||.|                 .|.|::.||:.||.||::||.||||||:.||..
Zfish   180 ------ELFNPRKHRFSEDELKPQPMIKKAKKVFVPEDAKDDKYWSRRKKNNVAAKRSRDARRLK 238

  Fly   264 DMVLEQRVIELTKENHVLKAQLDAIR 289
            :..:..|...|.:||..|:.|:..:|
Zfish   239 ENQIAVRASFLERENAALRQQVAELR 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_001137792.1 bZIP_NFIL3 238..297 CDD:269842 23/52 (44%)
coiled coil 239..297 CDD:269842 22/51 (43%)
tefbNP_001018497.1 bZIP_HLF 213..265 CDD:269843 23/52 (44%)
coiled coil 214..265 CDD:269843 22/51 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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