DRSC/TRiP Functional Genomics Resources

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Protein Alignment vri and nfil3-6

DIOPT Version :9

Sequence 1:NP_001137792.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001002218.1 Gene:nfil3-6 / 431765 ZFINID:ZDB-GENE-040704-63 Length:350 Species:Danio rerio


Alignment Length:553 Identity:120/553 - (21%)
Similarity:171/553 - (30%) Gaps:266/553 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 GPQSAL---TAAQKELFSQRKQREFTPDNKKDESYWDRRRRNNEAAKRSREKRRYNDMVLEQRVI 272
            |..|||   ..:...:.|.|::|||.|..|||:.|||:|::|||||||||||||.||||||.||:
Zfish    23 GRTSALKRKDVSPSSISSARRKREFIPHEKKDDGYWDKRKKNNEAAKRSREKRRVNDMVLENRVL 87

  Fly   273 ELTKENHVLKAQLDAIRDKFNISGENLVSVEKILASLPTSEQVLSNTKRAKMSGSGGSSSGSSPS 337
            .|.:||..|:|:|.|::.:|.:..:            |::..:|                   |.
Zfish    88 TLLEENARLRAELLALKFRFGLIKD------------PSNASIL-------------------PL 121

  Fly   338 GSGSGEGSPQGGHNGYPVGPPLSPLIYGPNGNARPEATVKSVHHIHHAGVAPPPTHLQQLVVPQS 402
            .:||....|...|            .|.|.|:.           .||.|                
Zfish   122 TTGSCVPQPSAQH------------YYLPRGDG-----------AHHTG---------------- 147

  Fly   403 QTQHLYQPQPQQHQPHQQQQISQPPQQQQQQQEPSPS--AGSSSPVISDPHNRPPSTTIANLQVQ 465
                   |.|....|.|    |.||..:..:...|.|  :|.|:|                    
Zfish   148 -------PMPSNQSPTQ----SAPPSSRSIRDTSSMSEDSGFSTP-------------------- 181

  Fly   466 LQQALNRNVRPEDLDSLRKVVAAGALYNAAAVVGAPPPPPSAGLYVPAPSAYKDHLEAAAAWSHN 530
                                                     .|..|.:|..::|.|         
Zfish   182 -----------------------------------------GGSSVGSPVFFEDRL--------- 196

  Fly   531 VEAAVSSSAVDAVSSSSVSGSAASVLNLSRRACSPSYEHMLSSTTSSTLSSASSSGAVS---GDD 592
                                                                |..|.:|   .|:
Zfish   197 ----------------------------------------------------SDHGKLSPHRADE 209

  Fly   593 ---EQEHEPA-------HMAPLQLQRSSPQQGSDANNCLPLKLRHKS-------HLGDKDAAATA 640
               |..|.|:       |..|     |:..:..|....||.|||.||       :||::.:||..
Zfish   210 LCYESHHSPSDLLAVGNHNMP-----STRLESMDGMKSLPHKLRFKSPGGGDCENLGERQSAAIP 269

  Fly   641 LLSLQ-HIKQEPNCSRASPPAWNDGGDNSSDERDSGISIASAEWTAQLQRKLLAPKEANV---VT 701
            :.:.: |..........:|   :||.|                     .||::..:..|.   |.
Zfish   270 MANARVHSYTHEGAGYWTP---HDGED---------------------ARKVIQQQHVNYSHNVN 310

  Fly   702 SAE-----RDQMLKSQLERLESEVASIKMILAE 729
            :.|     .:.||||||..|..|||.:|.:.:|
Zfish   311 ANESQYQAENSMLKSQLSSLSEEVAQLKKLFSE 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_001137792.1 bZIP_NFIL3 238..297 CDD:269842 35/58 (60%)
coiled coil 239..297 CDD:269842 34/57 (60%)
nfil3-6NP_001002218.1 bZIP_NFIL3 53..112 CDD:269842 35/58 (60%)
coiled coil 54..112 CDD:269842 34/57 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578031
Domainoid 1 1.000 74 1.000 Domainoid score I9070
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I4649
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1450431at2759
OrthoFinder 1 1.000 - - FOG0002055
OrthoInspector 1 1.000 - - otm24853
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15284
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5136
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.930

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