DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vri and gt

DIOPT Version :9

Sequence 1:NP_001137792.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster


Alignment Length:344 Identity:77/344 - (22%)
Similarity:126/344 - (36%) Gaps:113/344 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TDTNYINNYKQDNPSNNKFPRIQ-AQSNNSHLQHQQQLQQKLAQLH---HYSQQKLSGSDFPYGP 90
            |..:|.:.....:|::|.....| .|..:...|.|||.||:||.|:   :||..           
  Fly   120 TSYSYGSGSPSASPTSNLLYAAQMQQQQHQQQQQQQQQQQQLASLYPAFYYSNI----------- 173

  Fly    91 RPPTGGKEEKLLLLAPPGKLYPEASV-----------------------------STAMPEVLSG 126
                  |:|:....|.|.|:.|.|::                             ||...:||..
  Fly   174 ------KQEQATPTAAPPKVTPTANLLQTFAAASAAAAAAAAASSTNSPRPASNASTMQIDVLEN 232

  Fly   127 ---------TPTNSHN--------------------KANIA----MMNNVRLSN--------ISP 150
                     |||.|.:                    .||.|    :::|.|:..        :..
  Fly   233 PLSPAVEATTPTTSSSGEAGKNTRPFKAFPRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQ 297

  Fly   151 TLSMNGSSNEASN--LHPLSMYGGSISPQSNDSGMSDSLGKYVPGSGYGDGMMAQSPSQGGNGPQ 213
            ..|.||.|...:|  :...:...||::..|:.:..|:|..:......      :...||.||...
  Fly   298 IRSSNGGSRTVTNPKMRRTNSRSGSVNEGSSSNNNSESEDRAAAEES------SDCDSQAGNFES 356

  Fly   214 SALTAAQKELFSQRKQREFTPDNK--------KDESYWDRRRRNNEAAKRSREKRRYNDMVLEQR 270
            .:.|::...|.:.      |..|.        ||.:|::|||:||.|||:||::||..:..:..|
  Fly   357 KSATSSSSNLANA------TAANSGISSGSQVKDAAYYERRRKNNAAAKKSRDRRRIKEDEIAIR 415

  Fly   271 VIELTKENHVLKAQLDAIR 289
            ...|.::|..|..|:||::
  Fly   416 AAYLERQNIELLCQIDALK 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_001137792.1 bZIP_NFIL3 238..297 CDD:269842 22/52 (42%)
coiled coil 239..297 CDD:269842 21/51 (41%)
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 22/52 (42%)
coiled coil 384..440 CDD:269843 21/51 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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