DRSC/TRiP Functional Genomics Resources

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Protein Alignment vri and tefa

DIOPT Version :9

Sequence 1:NP_001137792.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_005156192.1 Gene:tefa / 30674 ZFINID:ZDB-GENE-990415-264 Length:306 Species:Danio rerio


Alignment Length:231 Identity:53/231 - (22%)
Similarity:83/231 - (35%) Gaps:70/231 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 APPGKLYPEASVSTAMPEVLSGTPTNSHNKANIAMMNNVRLSNISP---TLSMNGSSNEASNLHP 166
            ||...|.|..::.....||::.|.::|.:..|.:..|.:....|:|   .:.:|           
Zfish   126 APAVTLLPVMALDPCEEEVVTITTSSSSSADNKSEENRMTPDPINPDEIEVDVN----------- 179

  Fly   167 LSMYGGSISPQSNDSGMSDSLGKYVPGSGYGDGMMAQSPSQGGNGPQSALTAAQKELFSQRKQR- 230
                   ..|...|..:|.     :||.                           |||..||.| 
Zfish   180 -------FEPDPTDLVLSS-----IPGG---------------------------ELFDPRKHRF 205

  Fly   231 ----------------EFTPDNKKDESYWDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTKENH 279
                            .|.|:::||:.||.||::||.||||||:.||..:..:..|...|.:||.
Zfish   206 SEEELKPQPMIKKAKKVFVPEDQKDDKYWQRRKKNNVAAKRSRDARRLKENQITVRAAFLERENS 270

  Fly   280 VLKAQLDAIRDKFNISGENLVSVEKILASLPTSEQV 315
            .|:.::..:|..|......:...|....:|...|.|
Zfish   271 ALRQEVAELRKDFGRCKNTVARYEAKYGALGPEEDV 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_001137792.1 bZIP_NFIL3 238..297 CDD:269842 23/58 (40%)
coiled coil 239..297 CDD:269842 22/57 (39%)
tefaXP_005156192.1 bZIP_HLF 229..288 CDD:269843 23/58 (40%)
coiled coil 230..288 CDD:269843 22/57 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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