DRSC/TRiP Functional Genomics Resources

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Protein Alignment vri and Cebpe

DIOPT Version :9

Sequence 1:NP_001137792.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_058791.1 Gene:Cebpe / 25410 RGDID:2329 Length:281 Species:Rattus norvegicus


Alignment Length:270 Identity:60/270 - (22%)
Similarity:96/270 - (35%) Gaps:80/270 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 HYSQQKLSGSDFPYGPRP-----PTGGKEEKLL---LLAPPGKLYPEA---SVSTAMPEVLSGTP 128
            ||         .|..|||     .|.|.:.|.|   :.:.||...|.|   ......||...||.
  Rat    79 HY---------LPADPRPFAYPSHTFGPDRKALGPGIYSNPGSYDPRAVAVKEEPRGPEGNRGTG 134

  Fly   129 TNSHN--KANIAMMNNVRLSNISPTLSMNGSSNEASNLHPLSMYGGSISPQSNDSGMSDSLGKYV 191
            ..|:|  :..:|......: ::.|||:..|        .||.:....::                
  Rat   135 RGSYNPLQYQVAHCGQTAV-HLPPTLAAPG--------QPLRVLKAPVA---------------- 174

  Fly   192 PGSGYGDGMMAQSPSQGGNGPQSALTAAQKELFSQRKQREFTPDNKKDESYWDRRRRNNEAAKRS 256
                      |.:|      |.|.|..|........|.::..  ||....|..||.|||.|.::|
  Rat   175 ----------AAAP------PCSPLLKAPSPAGPSHKGKKAV--NKDSLEYRLRRERNNIAVRKS 221

  Fly   257 REKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKFNISGENLVSVEKILASLPTSEQVLSNTKR 321
            |:|.:...|..:|:|:|...||..|::::|.:.       :.|.::..:...:|.:..::     
  Rat   222 RDKAKRRIMETQQKVLEYMAENERLRSRVDQLT-------QELDTLRNLFRQIPEAASLI----- 274

  Fly   322 AKMSGSGGSS 331
               .|.||.|
  Rat   275 ---KGVGGCS 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_001137792.1 bZIP_NFIL3 238..297 CDD:269842 18/58 (31%)
coiled coil 239..297 CDD:269842 18/57 (32%)
CebpeNP_058791.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
bZIP_CEBPE 202..262 CDD:269863 20/66 (30%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 208..245 15/36 (42%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 246..267 3/27 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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