DRSC/TRiP Functional Genomics Resources

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Protein Alignment vri and Hlf

DIOPT Version :9

Sequence 1:NP_001137792.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_006533067.1 Gene:Hlf / 217082 MGIID:96108 Length:296 Species:Mus musculus


Alignment Length:187 Identity:56/187 - (29%)
Similarity:87/187 - (46%) Gaps:41/187 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 SNISPTLSMNGSSNEASNLHPLSMYGGSISPQSNDSGMSDSLGKYVPGS---------------- 194
            |:.:|:: |:.||...:.|||     |..||....|.:..  |:.:|.:                
Mouse   117 SSTAPSV-MDLSSRATAPLHP-----GIPSPNCMQSPIRP--GQLLPANRNTPSPIDPDTIQVPV 173

  Fly   195 GY----GDGMMAQSPSQGGNGPQSALTAAQKELFSQ---RKQRE-FTPDN-KKDESYWDRRRRNN 250
            ||    .|..::..|.|....|:.. ..:::||..|   :|.|: |.||: |:|:.||.|||:||
Mouse   174 GYEPDPADLALSSIPGQEMFDPRKR-KFSEEELKPQPMIKKARKVFIPDDLKQDDKYWARRRKNN 237

  Fly   251 EAAKRSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKFNISGENLVSVEKILA 307
            .||||||:.||..:..:..|...|.|||..|:.::..:|       :.|...:.|||
Mouse   238 MAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLR-------KELGKCKNILA 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_001137792.1 bZIP_NFIL3 238..297 CDD:269842 23/58 (40%)
coiled coil 239..297 CDD:269842 23/57 (40%)
HlfXP_006533067.1 bZIP_HLF 226..284 CDD:269843 24/64 (38%)
coiled coil 226..284 CDD:269843 24/64 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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