DRSC/TRiP Functional Genomics Resources

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Protein Alignment vri and cebp-2

DIOPT Version :9

Sequence 1:NP_001137792.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_871835.1 Gene:cebp-2 / 172319 WormBaseID:WBGene00016754 Length:100 Species:Caenorhabditis elegans


Alignment Length:113 Identity:29/113 - (25%)
Similarity:51/113 - (45%) Gaps:19/113 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 RKQREFTPDNKKDESYWDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDK 291
            ||:....|....::.|..:|:|||||..|:|:|:|..:....::|.||.|||..|:.:::.::.:
 Worm     5 RKRNTSEPREDDEDDYSTKRKRNNEAVNRTRQKKRQEENDTAEKVDELKKENETLERKVEQLQKE 69

  Fly   292 FNISGENLVSVEKILASLPTSEQVLSNTKRAKMSGSGGSSSGSSPSGS 339
            .:...|..::.                   ||..|:.|......||.|
 Worm    70 LSFLKEMFMAY-------------------AKNDGNDGPPPPPPPSSS 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_001137792.1 bZIP_NFIL3 238..297 CDD:269842 18/58 (31%)
coiled coil 239..297 CDD:269842 18/57 (32%)
cebp-2NP_871835.1 bZIP_CEBP 16..75 CDD:269841 18/58 (31%)
coiled coil 20..71 CDD:269841 18/50 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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