DRSC/TRiP Functional Genomics Resources

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Protein Alignment vri and cebp-2

DIOPT Version :10

Sequence 1:NP_477191.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_871835.1 Gene:cebp-2 / 172319 WormBaseID:WBGene00016754 Length:100 Species:Caenorhabditis elegans


Alignment Length:113 Identity:29/113 - (25%)
Similarity:51/113 - (45%) Gaps:19/113 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 RKQREFTPDNKKDESYWDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDK 291
            ||:....|....::.|..:|:|||||..|:|:|:|..:....::|.||.|||..|:.:::.::.:
 Worm     5 RKRNTSEPREDDEDDYSTKRKRNNEAVNRTRQKKRQEENDTAEKVDELKKENETLERKVEQLQKE 69

  Fly   292 FNISGENLVSVEKILASLPTSEQVLSNTKRAKMSGSGGSSSGSSPSGS 339
            .:...|..::.                   ||..|:.|......||.|
 Worm    70 LSFLKEMFMAY-------------------AKNDGNDGPPPPPPPSSS 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vriNP_477191.1 bZIP_NFIL3 238..297 CDD:269842 18/58 (31%)
coiled coil 239..297 CDD:269842 18/57 (32%)
cebp-2NP_871835.1 bZIP_CEBP 16..75 CDD:269841 18/58 (31%)
coiled coil 17..75 CDD:269841 18/57 (32%)

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